Factsheet for TraesCS2D01G308500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	95.18	94.99
TraesCS2B01G327200.1	Wheat	nucleus	94.78	92.91
TraesCS2A01G310200.1	Wheat	vacuole	92.97	91.68
TraesCS6D01G089200.1	Wheat	golgi	77.71	89.58
Os04t0443300-00	Rice	vacuole	77.91	77.6
Zm00001d025475_P001	Maize	extracellular, vacuole	76.51	74.85
EES12225	Sorghum	plastid	76.51	73.98
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	58.43	62.99
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	62.25	62.75
KRH56424	Soybean	extracellular, vacuole	59.64	61.36
AT1G71380.1	Thale cress	extracellular	59.24	60.95
KRH62487	Soybean	extracellular, vacuole	59.24	60.95
CDY12503	Canola	extracellular, vacuole	58.43	60.25
CDY25758	Canola	extracellular, vacuole	58.23	60.04
CDX96319	Canola	extracellular, plastid, vacuole	58.23	59.92
CDY66787	Canola	extracellular, plastid, vacuole	58.03	59.71
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	57.83	59.63
AT1G22880.1	Thale cress	extracellular	57.83	59.5
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	57.83	59.5
Solyc11g040340.1.1	Tomato	extracellular, vacuole	57.23	59.5
PGSC0003DMT400021687	Potato	vacuole	57.23	59.13
Bra007982.1-P	Field mustard	extracellular	57.23	58.88
CDY03687	Canola	extracellular	56.63	58.26
CDY37939	Canola	extracellular, vacuole	56.22	57.97
CDY03686	Canola	extracellular	55.82	57.56
Bra007983.1-P	Field mustard	extracellular	55.42	57.14
CDY37936	Canola	extracellular	51.81	56.58
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	55.62	55.62
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.61	53.51
TraesCS7D01G314400.1	Wheat	vacuole	53.01	53.44
TraesCS7D01G207600.1	Wheat	extracellular	52.21	52.1
TraesCS6D01G275900.1	Wheat	extracellular	50.6	50.6
TraesCS5D01G323700.2	Wheat	vacuole	50.8	46.0
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	42.17	45.26
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	43.98	44.69
TraesCS1D01G075100.1	Wheat	vacuole	43.78	44.49
TraesCS1D01G090100.1	Wheat	extracellular	44.58	44.14
TraesCS1D01G074800.1	Wheat	vacuole	40.16	43.1
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.17	40.64
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	42.97	40.23
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.57	40.19
TraesCS6D01G291800.1	Wheat	vacuole	43.17	39.52
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.96	39.17
TraesCS5D01G208900.1	Wheat	vacuole	41.97	38.99
TraesCS2D01G557500.1	Wheat	extracellular	45.58	36.79
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	44.58	35.81
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	43.78	33.38

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:21.1.3.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF54	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G308500
EnsemblPlants:TraesCS2D01G308500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:395556937..395558729

Molecular Weight (calculated)

53891.1 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.272

Length

498 amino acids

Sequence
(BLAST)

001: MSNSAALAPS SRASAFLVFS LVWFSSHVLA AGHPDYADAL AKSLLFFQGQ RSGPQPADQA VKWRSNSAMS DGSAANVDLT GGYYDGGDNV KFNFPMAFTA
101: TMLSWSIIEY GGRMEARVHD ARAAVRWATD YLLKAAKTTP GKLYVGVGDA DADHRCWERP EDMDTPRNVY EVSASTPGSD VAGETAAALA AASVVFKAAD
201: PAYSRRLVAA ARDVMAFAWQ HQGKYSDHVG GGVSNYYPSY SGYKDELLWG STWLLWATKN SSYLNDLMSL GANDGVDMFS WDNKLAGARV LLSRRALLDG
301: DKRLEPFTRQ AEEFICRVLP KSSSPTSTTP YTPGGLMHRS GNANLQYVAS ASFLLTTYAK YMAVSNRAFS CQNLPVTYKA LRALAKRQVD YVLGDNPLGM
401: SYMVGYGARS PQRIHHRASS MPSVAAHPAH IGCQEGFQGY LYAGGPNPNV HTGAVVGGPD QNDVFPDDRA DYARSEPTTY TNAPLVGCLA YFAGSYKK

Best Arabidopsis Sequence Match ( AT1G71380.1 )
(BLAST)

001: MTSLFFFVLL FSSLLISNGD ANPNYKEALS KSLLFFQGQR SGPLPRGQQI SWRASSGLSD GSAAHVDLTG GYYDAGDNVK FNLPMAFTTT MLSWSALEYG
101: KRMGPELENA RVNIRWATDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSASNPGSDV AAETAAALAA ASMVFRKVDS KYSRLLLATA
201: KDVMQFAIQY QGAYSDSLSS SVCPFYCSYS GYKDELMWGA SWLLRATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA
301: ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFSSNFPKR
401: IHHRASSLPS HALRSQSLGC NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA GRST

Arabidopsis Description

CEL3Endoglucanase [Source:UniProtKB/TrEMBL;Acc:Q0V7W1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.