Factsheet for TraesCS7D01G201000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G104600.1	Wheat	vacuole	97.18	97.0
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	97.93	89.37
OQU76161	Sorghum	vacuole	69.92	84.35
HORVU7Hr1G040680.3	Barley	vacuole	87.78	83.54
Zm00001d044744_P001	Maize	extracellular, vacuole	83.08	81.55
Os06t0247900-01	Rice	cytosol	68.23	79.43
TraesCS6D01G291800.1	Wheat	vacuole	79.89	78.12
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.73	68.93
PGSC0003DMT400001781	Potato	extracellular, vacuole	61.28	64.81
Solyc07g049300.2.1	Tomato	extracellular, vacuole	61.09	64.61
TraesCS5D01G208900.1	Wheat	vacuole	64.29	63.81
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.16	63.52
GSMUA_Achr7P02160_001	Banana	vacuole	60.53	63.14
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	61.47	62.76
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	60.15	62.75
KRH14764	Soybean	cytosol, nucleus, vacuole	47.37	62.07
Bra005536.1-P	Field mustard	vacuole	60.71	61.88
CDY17123	Canola	vacuole	60.71	61.88
CDY19428	Canola	vacuole	60.71	61.88
AT2G32990.1	Thale cress	extracellular, vacuole	60.71	61.52
CDY19174	Canola	vacuole	60.9	61.48
KRH73374	Soybean	vacuole	60.53	61.45
CDY23776	Canola	vacuole	59.77	60.46
Bra021821.1-P	Field mustard	vacuole	57.33	59.92
TraesCS1D01G075100.1	Wheat	vacuole	45.11	48.98
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	45.11	48.98
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	42.48	48.71
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	55.64	47.74
TraesCS7D01G314400.1	Wheat	vacuole	43.98	47.37
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	43.98	46.99
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.8	46.69
TraesCS1D01G074800.1	Wheat	vacuole	40.6	46.55
TraesCS6D01G275900.1	Wheat	extracellular	42.29	45.18
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	55.08	44.87
TraesCS1D01G090100.1	Wheat	extracellular	42.29	44.73
TraesCS2D01G557500.1	Wheat	extracellular	51.32	44.25
TraesCS6D01G089200.1	Wheat	golgi	35.9	44.21
TraesCS7D01G207600.1	Wheat	extracellular	41.35	44.09
TraesCS2D01G308500.1	Wheat	golgi	40.23	42.97
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.91	40.75
TraesCS5D01G323700.2	Wheat	vacuole	41.35	40.0

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF52	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G201000	EnsemblPlants:TraesCS7D01G201000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:159736251..159739092

Molecular Weight (calculated)

58415.2 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.340

Length

532 amino acids

Sequence
(BLAST)

001: MRRSSGAAAW ALGVAVAFFL AAEAAGAAPV PHDYEQALRK SLLYFEAQRS GRLPYGQRVA WRDHSGLTDG LEQGVDLVGG YYDAGDHVKF GLPMAFTVTM
101: LSWSLLEYGG DVAAAGELAH ALESIKWGTD YFIKAHTKPD ELWAEVGDGD TDHYCWQRPE DMTTSRQAYK VDRERPGSDV AGETAAALAA ASMAFRETNP
201: HYAHLLLHHA QQLFEFADKY RGKYDSSIAE VKSYYASVSG YHDELLWAAL WLHRATGRAS YLDYVVDNAH EFGGTGWAIT EFSWDVKYAG VQILATRLLL
301: RGEHEERHRA TLEGYRAKAE HYVCACMGRN AAAEDNVERS PGGMLYVRQW NNMQYVTSAA YLLSVYSGYL TEAGAGKGAA VTCAGGEASA DAGEVFAHAR
401: AQVDYVLGSN PRGISYLVGY GAKFPARVHH RAASIVPYKD RKEFIGCAQG FDDWFGRKSA NPNVVVGAIV GGPDRHDRFR DDRVNYMQTE ACTYNTAPMV
501: GMFAMLNRLA RQEGPSPAAR RPESSRSTAA AE

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.