Factsheet for TraesCS7A01G197900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	89.37	97.93
TraesCS7B01G104600.1	Wheat	vacuole	88.16	96.44
OQU76161	Sorghum	vacuole	63.46	83.9
HORVU7Hr1G040680.3	Barley	vacuole	79.76	83.18
Zm00001d044744_P001	Maize	extracellular, vacuole	75.64	81.37
Os06t0247900-01	Rice	cytosol	62.44	79.65
TraesCS6A01G312400.1	Wheat	vacuole	72.21	78.11
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	51.29	71.53
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	61.41	69.51
TraesCS7A01G144700.1	Wheat	vacuole	61.41	69.11
PGSC0003DMT400001781	Potato	extracellular, vacuole	55.57	64.41
Solyc07g049300.2.1	Tomato	extracellular, vacuole	55.4	64.21
TraesCS5A01G202600.1	Wheat	vacuole	58.66	63.81
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.63	63.52
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	54.72	62.55
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	55.75	62.38
GSMUA_Achr7P02160_001	Banana	vacuole	54.2	61.96
KRH14764	Soybean	cytosol, nucleus, vacuole	43.05	61.82
Bra005536.1-P	Field mustard	vacuole	55.06	61.49
CDY17123	Canola	vacuole	55.06	61.49
CDY19428	Canola	vacuole	55.06	61.49
KRH73374	Soybean	vacuole	54.89	61.07
AT2G32990.1	Thale cress	extracellular, vacuole	54.89	60.95
CDY19174	Canola	vacuole	55.06	60.91
CDY23776	Canola	vacuole	54.03	59.89
Bra021821.1-P	Field mustard	vacuole	51.8	59.33
TraesCS1A01G072100.1	Wheat	nucleus	40.48	48.16
TraesCS1A01G072300.1	Wheat	vacuole	40.65	47.98
TraesCS7A01G317700.1	Wheat	extracellular	40.48	47.77
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	50.26	47.18
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	40.31	47.09
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	50.26	46.51
TraesCS6A01G295300.1	Wheat	extracellular	38.42	45.16
TraesCS1A01G088700.1	Wheat	extracellular	38.94	44.86
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.48	44.53
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	40.14	44.4
TraesCS7A01G204500.1	Wheat	extracellular	37.91	43.94
TraesCS6A01G093200.1	Wheat	golgi	37.05	43.46
TraesCS5A01G317400.1	Wheat	plastid	37.91	43.33
TraesCS2A01G310200.1	Wheat	vacuole	36.71	42.38
TraesCS2A01G556300.1	Wheat	vacuole	46.48	42.02
TraesCS6A01G337300.1	Wheat	mitochondrion	35.33	40.63

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF52	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G197900	EnsemblPlants:TraesCS7A01G197900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:158394901..158398653

Molecular Weight (calculated)

63536.4 Da

IEP (calculated)

6.821

GRAVY (calculated)

-0.328

Length

583 amino acids

Sequence
(BLAST)

001: MRSSSGAAAW ALGVAVAFFL AAEAAGAAPV PHDYEQALRK SLLYFEAQRS GRLPHGQRVA WRDHSGLTDG LEQGVDLVGG YYDAGDHVKF GLPMAFTVTM
101: LSWSLLEYGG DVAAAGELAH ALESIKWGTD YFIKAHTKPD ELWAEVGDGD TDHYCWQRPE DMTTSRQAYK VDRERPGSDV AGETAAALAA ASMAFRETNP
201: HYAHLLLHHA QQLFEFADKY RGKYDSSIAE VKSYYASVSG YHDELLWAAL WLHRATGRAS YLDYVVDNAD EFGGTGWAIT EFSWDVKYAG VQILATRLLL
301: RGEHEERHRA TLEGYRAKAE HYVCACMGRN AAAEDNVERS PGGMLYVRQW NNMQYVTSAA YLLSVYSGYL TEAGAGEGAA VTCAGGEASA DAGEVFAHAR
401: AQVDYVLGSN PRGISYLVGY GAKFPARVHH RAASIVPYKD RKEFIGCAQG FDDWFGRKSA NPNVVVGAIV GGPDRHDRFR DDRVNYMQTE ACTYNTAPMV
501: GMFAMLNRVA REQGPSPAAR RPESNVSPAP CGLSKQKATS GVAKPSSPPS PVVARSVCWP CKPPRRLQAA AITVASHNKG HDV

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.