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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23560.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT4G23560.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT4G23560.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G090100.1 Wheat extracellular 95.85 96.42
TraesCS1B01G107700.1 Wheat extracellular 96.25 96.25
HORVU1Hr1G019520.1 Barley golgi, mitochondrion, vacuole 93.87 89.12
Os08t0387400-01 Rice extracellular 79.45 77.91
Zm00001d032271_P001 Maize extracellular 75.49 74.76
EES13778 Sorghum extracellular 76.09 74.47
VIT_02s0025g00430.t01 Wine grape extracellular, vacuole 58.3 58.65
Bra013709.1-P Field mustard extracellular 55.53 58.54
CDX94202 Canola vacuole 55.53 58.54
CDY44116 Canola extracellular 55.53 58.54
Bra019296.1-P Field mustard extracellular, vacuole 55.34 58.33
CDY10945 Canola extracellular, vacuole 55.34 58.33
AT4G23560.1 Thale cress extracellular 55.14 58.25
CDY10895 Canola extracellular 55.14 58.12
AT4G09740.1 Thale cress extracellular 53.95 57.11
KRH27886 Soybean extracellular 56.92 56.36
PGSC0003DMT400031762 Potato extracellular 55.73 56.18
Solyc08g081620.2.1 Tomato extracellular 55.53 56.09
TraesCS5A01G172100.1 Wheat extracellular, vacuole 48.62 49.3
TraesCS1A01G360700.3 Wheat extracellular, vacuole 49.01 47.06
TraesCS7A01G317700.1 Wheat extracellular 45.85 46.96
TraesCS7A01G204500.1 Wheat extracellular 45.85 46.12
TraesCS5A01G172200.1 Wheat endoplasmic reticulum, extracellular, vacuole 48.22 46.04
TraesCS6A01G295300.1 Wheat extracellular 44.47 45.36
TraesCS1A01G072300.1 Wheat vacuole 44.27 45.34
TraesCS1A01G072100.1 Wheat nucleus 43.68 45.1
TraesCS5A01G317400.1 Wheat plastid 45.26 44.9
TraesCS2A01G310200.1 Wheat vacuole 44.47 44.55
TraesCS6A01G093200.1 Wheat golgi 43.68 44.47
TraesCS7A01G144500.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.07 43.3
TraesCS7A01G144700.1 Wheat vacuole 43.68 42.66
TraesCS7A01G144400.1 Wheat cytosol, vacuole 35.18 42.58
TraesCS6A01G337300.1 Wheat mitochondrion 42.49 42.41
TraesCS6A01G122100.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.68 41.78
TraesCS6A01G312400.1 Wheat vacuole 44.27 41.56
TraesCS5A01G202600.1 Wheat vacuole 42.49 40.11
TraesCS7A01G197900.1 Wheat extracellular, vacuole 44.86 38.94
TraesCS3A01G144600.1 Wheat extracellular, vacuole 45.26 36.35
TraesCS1A01G389300.1 Wheat extracellular, vacuole 43.48 35.43
TraesCS2A01G556300.1 Wheat vacuole 44.07 34.57
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:Glyco_hydro_9InterPro:IPR012341PFAM:PF00759PANTHER:PTHR22298PANTHER:PTHR22298:SF22SUPFAM:SSF48208
SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS1A01G088700EnsemblPlants:TraesCS1A01G088700.1SEG:seg::
Description
No Description!
Coordinates
chr1A:-:77074195..77076318
Molecular Weight (calculated)
54218.5 Da
IEP (calculated)
5.441
GRAVY (calculated)
-0.164
Length
506 amino acids
Sequence
(BLAST)
001: MATMAVKVWV VAMMLVVHCF DVGLGAGGDG LCLGSPDYGD ALAKAILFFE GQRSGRLPAN QRVSWRGNSA LADGRPENVN LTGGYYDAGD NVKFGFPMAF
101: TVTLLSWSAI EFRGDVAAAG QLGNLGAAIH WGADFLLRAH TSPTTLYTQV GDGNADHGCW ERPEDMDTPR TLYKVTADSP GSEAAGEAAA ALAAAYLVLK
201: EDGDKAFASR LLAASKSLFE LANNYRGSFQ SSCPFYCSYS GFQDELLWAS AWLYRATKDG KYLDFLRQNQ GSSNPVNEFS WDNKQVGAQM LATQEYLKGR
301: RELDRYKANL DSFVCALMPD SGNTQIRTTR GGLLFTRDSV NMQYTTTAAL VLSIYAKTLE SWGVSDGVRC SAASFSPDQI ASFAASQVDY ILGSNPMGMS
401: YMAGFGGAFP RRIHHRAASI PSIKVLTRTV PCNEGFSSWL PTSDPNPNVH VGAIVGGPDE NDQFGDNRGD SAHSEPATYI NAAFVGACAA AMGQSQKPAS
501: PTLASY
Best Arabidopsis Sequence Match ( AT4G23560.1 )
(BLAST)
001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG
Arabidopsis Description
AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.