Factsheet for TraesCS6A01G337300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
vacuole 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G368000.1	Wheat	extracellular	96.25	97.8
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	97.83	97.64
HORVU6Hr1G081500.1	Barley	plastid	93.29	90.79
Os02t0778600-01	Rice	plasma membrane	78.7	79.64
EES05890	Sorghum	vacuole	75.74	77.26
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	54.44	62.44
VIT_04s0008g02020.t01	Wine grape	vacuole	59.57	62.14
GSMUA_Achr6P22750_001	Banana	vacuole	63.51	61.92
CDY21221	Canola	golgi, vacuole	58.97	61.52
CDY30943	Canola	golgi, vacuole	58.97	61.52
Bra019455.1-P	Field mustard	golgi, vacuole	58.78	61.32
CDX87948	Canola	extracellular, vacuole	58.78	61.32
CDY12319	Canola	cytosol, extracellular, vacuole	58.78	61.32
KRH52260	Soybean	extracellular, vacuole	58.38	61.28
AT3G43860.1	Thale cress	extracellular, vacuole	58.58	61.11
KRH52262	Soybean	extracellular, vacuole	58.19	61.08
PGSC0003DMT400052749	Potato	extracellular, vacuole	57.59	60.08
VIT_04s0008g02010.t01	Wine grape	vacuole	57.2	59.3
Solyc06g066120.2.1	Tomato	extracellular, vacuole	56.61	59.05
TraesCS7A01G317700.1	Wheat	extracellular	44.38	45.55
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	42.8	43.49
TraesCS1A01G088700.1	Wheat	extracellular	42.41	42.49
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	43.98	42.31
TraesCS5A01G317400.1	Wheat	plastid	42.01	41.76
TraesCS6A01G295300.1	Wheat	extracellular	40.63	41.53
TraesCS7A01G204500.1	Wheat	extracellular	40.83	41.15
TraesCS1A01G072100.1	Wheat	nucleus	39.45	40.82
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.41	40.57
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.03	40.39
TraesCS1A01G072300.1	Wheat	vacuole	39.05	40.08
TraesCS7A01G144700.1	Wheat	vacuole	40.83	39.96
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	32.54	39.47
TraesCS6A01G093200.1	Wheat	golgi	38.66	39.44
TraesCS2A01G310200.1	Wheat	vacuole	39.25	39.41
TraesCS6A01G312400.1	Wheat	vacuole	41.42	38.96
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.24	38.56
TraesCS5A01G202600.1	Wheat	vacuole	39.84	37.69
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	43.98	35.4
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	40.63	35.33
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	41.03	33.49
TraesCS2A01G556300.1	Wheat	vacuole	41.03	32.25

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF31	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G337300	EnsemblPlants:TraesCS6A01G337300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:571176768..571180402

Molecular Weight (calculated)

55325.9 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.242

Length

507 amino acids

Sequence
(BLAST)

001: MKKRHTPASC RGGGEGVRCG VALLLAALVL SGDVAGATSF NYKDALTKSI MFLEAQRSGK LPPDNRIKWR GDSGMEDGKL AHVDLTGGYY DAGDNVKYGL
101: PLAFTVTTLA WAALAFKPEL QTAGELKHVQ EAIRWGTDYI LKCAAKKNHM WVQVGDPNLD HQCWVRPENM PTPRTLYQID GNTPGTEIAA ETAAALAASA
201: MVFRNDKNYA RRLMNKAKLL YQFARSHLKT YDGECPFYCS YSGYNDELLW AATWLFMATK RQVYADFITH EAISSSVAEF SWDLKYPGAQ ILLAPHNMNA
301: SGGLQSYKTQ ADNFVCAVLP DTPFHQVFIT PGGMIHLRDG ANSQYVTGTA FLFLVYADWL HTARQDVMCG ATPIKPARLR EFAKQQMDYL LGANPRGRSY
401: VVGFGANPPT QPHHRGASTP VLKPGTVVNC GMSFGDWFAP DRPNPNELTG AIMGGPDGAD NFIDKRNASA CTEPCTYINS LAIGALAALA GRGPNLVASK
501: SHGYDQM

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.