Factsheet for Bra034983.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12319	Canola	cytosol, extracellular, vacuole	100.0	90.95
CDX87948	Canola	extracellular, vacuole	99.55	90.53
Bra019455.1-P	Field mustard	golgi, vacuole	91.63	83.33
AT3G43860.1	Thale cress	extracellular, vacuole	88.69	80.66
VIT_04s0008g02020.t01	Wine grape	vacuole	71.04	64.61
KRH52262	Soybean	extracellular, vacuole	69.23	63.35
KRH52260	Soybean	extracellular, vacuole	69.0	63.15
VIT_04s0008g02010.t01	Wine grape	vacuole	68.1	61.55
Solyc06g066120.2.1	Tomato	extracellular, vacuole	65.38	59.47
PGSC0003DMT400052749	Potato	extracellular, vacuole	64.25	58.44
Os02t0778600-01	Rice	plasma membrane	64.25	56.69
EES05890	Sorghum	vacuole	63.35	56.34
GSMUA_Achr6P22750_001	Banana	vacuole	65.16	55.38
TraesCS6B01G368000.1	Wheat	extracellular	62.22	55.11
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	62.9	54.72
TraesCS6A01G337300.1	Wheat	mitochondrion	62.44	54.44
HORVU6Hr1G081500.1	Barley	plastid	62.67	53.17
Bra019296.1-P	Field mustard	extracellular, vacuole	48.87	45.0
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	48.64	44.51
Bra004846.1-P	Field mustard	nucleus	46.15	43.4
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	47.51	43.39
Bra013709.1-P	Field mustard	extracellular	46.15	42.5
Bra004844.1-P	Field mustard	extracellular, vacuole	46.38	41.92
Bra004845.1-P	Field mustard	extracellular	46.38	41.92
Bra003946.1-P	Field mustard	extracellular	46.15	41.8
Bra007982.1-P	Field mustard	extracellular	45.48	41.53
Bra018559.1-P	Field mustard	extracellular, vacuole	48.19	41.44
Bra024571.1-P	Field mustard	extracellular	46.15	41.3
Bra007983.1-P	Field mustard	extracellular	45.02	41.2
Bra032584.1-P	Field mustard	extracellular, vacuole	47.96	41.01
Bra036281.1-P	Field mustard	extracellular, vacuole	47.96	40.93
Bra016192.1-P	Field mustard	extracellular, vacuole	46.15	40.88
Bra011881.1-P	Field mustard	cytosol	43.67	40.63
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	43.44	40.34
Bra033592.1-P	Field mustard	extracellular	43.89	39.43
Bra005536.1-P	Field mustard	vacuole	46.15	39.08
Bra011882.1-P	Field mustard	extracellular	43.44	39.02
Bra033591.1-P	Field mustard	extracellular, vacuole	43.21	38.98
Bra021821.1-P	Field mustard	vacuole	43.89	38.11
Bra027735.1-P	Field mustard	extracellular, vacuole	48.42	34.52
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.42	34.46
Bra032270.1-P	Field mustard	extracellular	43.44	31.53
Bra018765.1-P	Field mustard	vacuole	44.34	31.41

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra034983
EnsemblPlants:Bra034983.1	EnsemblPlants:Bra034983.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:M4F1N7	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF31
SUPFAM:SSF48208	TMHMM:TMhelix	UniParc:UPI000253E5BA	SEG:seg	:	:

Description

AT3G43860 (E=2e-124) AtGH9A4 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrScaffold000100:+:630651..633176

Molecular Weight (calculated)

49265.7 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.301

Length

442 amino acids

Sequence
(BLAST)

001: MGNHGEKERG NVVIRAILLG LISIVCVNGT NINYKEALTK SLIFLEAQRS GKLPPNNRVP WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT
101: LAWSTIYYDK ELRASGELEN ARAAIRWGTD YFLKCASRKN RLYVQVGDPH LDHKCWARPE NMQTARTVLQ ISDKDPGTEI AAETAAALAA SSIVFRRIDH
201: KYSRRLLNKA KLLFKLAKSH KGSYDGACPF YCSCSGYNDE LLWAATWLYK ATRKQVYLSY LKFEAISGYV AEFSWDLKYA GGMIHLRDGA NTQYVTATAF
301: LFSAYADILQ KYNQKIFCGS KQFDSTHLMA FAKKQIDYIL GHNPQGRSYM VGFGPNPPKQ AHHRGASVPM SEANEPLSCP LSFVKWFNKN QPNANELTGA
401: IVGGPDRQDN FQDFRWTSVY TEPCTYINSI AVGILAKLAA TA

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.