Factsheet for Bra011881.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42599	Canola	cytosol	98.32	98.32
CDY41955	Canola	extracellular, vacuole	99.16	95.15
AT4G39010.1	Thale cress	extracellular, vacuole	93.26	89.13
KRH60771	Soybean	extracellular, vacuole	72.0	69.65
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	72.0	69.09
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	71.79	68.89
KRH51463	Soybean	extracellular	71.58	68.83
KRH29353	Soybean	extracellular, vacuole	72.42	68.53
Solyc01g110340.2.1	Tomato	extracellular, vacuole	70.95	67.94
GSMUA_Achr2P03400_001	Banana	extracellular	64.84	61.72
GSMUA_Achr1P07760_001	Banana	vacuole	64.63	61.28
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	55.79	60.23
TraesCS5A01G317400.1	Wheat	plastid	63.79	59.41
Bra033591.1-P	Field mustard	extracellular, vacuole	61.05	59.18
Bra033592.1-P	Field mustard	extracellular	61.26	59.15
TraesCS5B01G318000.1	Wheat	vacuole	63.79	59.06
HORVU5Hr1G081200.5	Barley	vacuole	63.58	58.64
Bra011882.1-P	Field mustard	extracellular	60.0	57.93
Os09t0530200-01	Rice	mitochondrion	62.32	57.48
Bra024571.1-P	Field mustard	extracellular	58.95	56.68
Bra003946.1-P	Field mustard	extracellular	57.89	56.35
Bra016192.1-P	Field mustard	extracellular, vacuole	58.53	55.71
TraesCS5D01G323700.2	Wheat	vacuole	64.21	55.45
Zm00001d021280_P004	Maize	vacuole	63.79	55.09
OQU89810	Sorghum	extracellular, plastid, vacuole	64.63	54.92
Bra032584.1-P	Field mustard	extracellular, vacuole	58.32	53.58
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	54.11	53.21
Bra007983.1-P	Field mustard	extracellular	53.89	53.0
Bra007982.1-P	Field mustard	extracellular	53.89	52.89
Bra018559.1-P	Field mustard	extracellular, vacuole	57.05	52.72
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	53.68	52.69
Bra036281.1-P	Field mustard	extracellular, vacuole	56.0	51.35
Bra019296.1-P	Field mustard	extracellular, vacuole	49.05	48.54
Bra013709.1-P	Field mustard	extracellular	48.84	48.33
Bra004846.1-P	Field mustard	nucleus	45.47	45.96
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	45.68	45.59
Bra019455.1-P	Field mustard	golgi, vacuole	44.84	43.83
Bra004845.1-P	Field mustard	extracellular	45.05	43.76
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.63	43.67
Bra004844.1-P	Field mustard	extracellular, vacuole	44.21	42.94
Bra005536.1-P	Field mustard	vacuole	45.26	41.19
Bra021821.1-P	Field mustard	vacuole	43.16	40.27
Bra027735.1-P	Field mustard	extracellular, vacuole	45.89	35.16
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.89	35.1
Bra032270.1-P	Field mustard	extracellular	44.21	34.48
Bra018765.1-P	Field mustard	vacuole	44.0	33.49

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra011881
EnsemblPlants:Bra011881.1	EnsemblPlants:Bra011881.1-P	GO:GO:0000003	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009791	GO:GO:0009828	GO:GO:0009987	GO:GO:0010047	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:1990059	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M4D5X4	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	UniParc:UPI0002545E7B	SEG:seg	:

Description

AT4G39010 (E=3e-258) AtGH9B18 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA01:-:93465..96379

Molecular Weight (calculated)

52452.1 Da

IEP (calculated)

4.706

GRAVY (calculated)

-0.366

Length

475 amino acids

Sequence
(BLAST)

001: MSSNQHDYSD ALSKSILFFE GQRSGYLPND QRLTWRRNSG LSDGWTHSTD LTGGYYDAGD NVKFNFPMAF TTTMLAWSVI EFGELMPPPE LRNALVALRW
101: SSDYLLKSVS QLPNRIFVQV GDPIADHNCW ERPEDMDTPR TAYVVNAPNP ASEVAGEITA ALSAASIAVR SSDPGYSQTL LQNAVKTFQF ADMHRGAYSS
201: NDDIKNDVCP FYCDFNGFQD ELLWGAAWLR KATGDESYLS YIESNREPFG ASENVDEFGW DNKIGGLNVL VSKEVITGNM YNLEAYKASA ESFMCSLVPE
301: SPGQHVEYTP GGLLYKPGGS QLQHATTISF LLLVYAQYLS RSSLSLNCGS LSVPPDHLRR LAKKQVDYIL GENPMGLSYM VGYGERYPKR IHHRGSSLPS
401: IVDHPGTVGC KDGSVYFNST EPNPNVLIGA VVGGPGEDDK YDDDRSDFRK SEPTTYINAP FVGVLAYFAA NPSFS

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.