Factsheet for Bra027699.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027735.1-P	Field mustard	extracellular, vacuole	98.39	98.55
KRH60035	Soybean	nucleus	79.71	79.33
KRH41305	Soybean	nucleus	79.55	79.04
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	77.13	76.15
Solyc08g082250.2.1	Tomato	extracellular	74.07	73.6
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	73.59	73.12
PGSC0003DMT400012809	Potato	extracellular, vacuole	62.96	72.41
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	65.54	69.57
Solyc12g055970.1.1	Tomato	cytosol, nucleus	49.92	67.1
Os01t0220100-01	Rice	extracellular, vacuole	62.64	60.78
EES19222	Sorghum	vacuole	60.87	60.29
Zm00001d010446_P001	Maize	vacuole	60.39	60.19
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	60.06	60.16
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	60.06	60.16
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	60.87	60.0
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	59.9	59.9
HORVU1Hr1G085830.2	Barley	vacuole	59.9	59.62
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	59.74	59.55
Os05t0212300-01	Rice	extracellular, vacuole	60.06	59.3
Bra005536.1-P	Field mustard	vacuole	49.44	58.81
Os01t0219600-00	Rice	mitochondrion	60.39	58.59
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	60.55	57.58
Zm00001d008952_P001	Maize	extracellular	59.74	57.52
Bra021821.1-P	Field mustard	vacuole	46.86	57.17
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	59.26	56.27
Bra004846.1-P	Field mustard	nucleus	38.65	51.06
Bra004845.1-P	Field mustard	extracellular	39.77	50.51
Bra024571.1-P	Field mustard	extracellular	39.77	50.0
Bra032270.1-P	Field mustard	extracellular	48.79	49.75
Bra004844.1-P	Field mustard	extracellular, vacuole	39.13	49.69
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	37.84	49.37
Bra019296.1-P	Field mustard	extracellular, vacuole	38.0	49.17
Bra003946.1-P	Field mustard	extracellular	38.49	48.98
Bra013709.1-P	Field mustard	extracellular	37.52	48.54
Bra016192.1-P	Field mustard	extracellular, vacuole	38.97	48.5
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.46	48.42
Bra018765.1-P	Field mustard	vacuole	48.63	48.4
Bra018559.1-P	Field mustard	extracellular, vacuole	39.61	47.86
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	37.2	47.83
Bra032584.1-P	Field mustard	extracellular, vacuole	39.77	47.78
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	37.04	47.52
Bra036281.1-P	Field mustard	extracellular, vacuole	39.45	47.3
Bra019455.1-P	Field mustard	golgi, vacuole	36.23	46.3
Bra007983.1-P	Field mustard	extracellular	35.75	45.96
Bra011881.1-P	Field mustard	cytosol	35.1	45.89
Bra007982.1-P	Field mustard	extracellular	35.43	45.45
Bra033592.1-P	Field mustard	extracellular	35.75	45.12
KXG31545	Sorghum	cytosol	39.45	45.04
Bra011882.1-P	Field mustard	extracellular	35.59	44.92
Bra033591.1-P	Field mustard	extracellular, vacuole	34.14	43.27

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra027699
EnsemblPlants:Bra027699.1	EnsemblPlants:Bra027699.1-P	InterPro:CBM_49	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M4EFY6	PFAM:PF00759
PFAM:PF09478	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF19	SMART:SM01063
SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002542310	SEG:seg	:

Description

AT1G64390 (E=0.0) AtGH9C2 | AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA09:-:6836831..6840180

Molecular Weight (calculated)

68537.2 Da

IEP (calculated)

9.975

GRAVY (calculated)

-0.275

Length

621 amino acids

Sequence
(BLAST)

001: MEIKFASVAA LLLLLSFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLAANGEL GHSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPAYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVARKYYGSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDSMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHT
301: AVFQKFQQKA DFFMCSLLGK GSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCSAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSY KVDRSFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYKQ TEPATYNNAP LLGVLARLSS GHSGYSQLLP
501: VVPAPVVVRR PMPIRKPRVT SPVRASGPVA IVQKMTGSWV SKGRTYYRYS TTVINKSPRA LKSLNLSIKN LYGPIWGLSR SGNSFGLPSW MQSLQSGKSL
601: EFVYIHSTSP ANVAVSSYTL A

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.