CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010446_P001	Maize	vacuole	94.26	94.86
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	84.85	85.67
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	84.53	85.48
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	84.37	85.32
HORVU1Hr1G085830.2	Barley	vacuole	83.41	83.81
Os05t0212300-01	Rice	extracellular, vacuole	81.98	81.72
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	68.42	65.6
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	58.85	63.08
CDY47849	Canola	extracellular, vacuole	60.77	61.45
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	61.24	61.44
KRH60035	Soybean	nucleus	61.08	61.38
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	60.45	61.13
PGSC0003DMT400012809	Potato	extracellular, vacuole	52.63	61.11
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	61.24	61.05
CDY46529	Canola	extracellular, vacuole	60.45	61.03
Bra027735.1-P	Field mustard	extracellular, vacuole	60.29	60.97
KRH41305	Soybean	nucleus	60.77	60.96
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	60.29	60.87
Solyc08g082250.2.1	Tomato	extracellular	60.61	60.8
CDX90780	Canola	endoplasmic reticulum, extracellular	59.17	59.27
CDY05130	Canola	extracellular, vacuole	58.69	58.79
AT4G11050.1	Thale cress	vacuole	58.05	58.15
EES15002	Sorghum	endoplasmic reticulum, extracellular	46.25	57.31
KXG31545	Sorghum	cytosol	48.33	55.7
OQU76161	Sorghum	vacuole	38.92	55.33
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	36.84	54.74
Solyc12g055970.1.1	Tomato	cytosol, nucleus	40.03	54.33
EER98860	Sorghum	golgi, mitochondrion, vacuole	46.73	54.06
EES06282	Sorghum	extracellular, vacuole	43.54	51.03
KXG21209	Sorghum	cytosol	31.1	50.13
EES00659	Sorghum	vacuole	39.39	49.3
EES13091	Sorghum	vacuole	48.33	48.1
EES04405	Sorghum	plasma membrane, vacuole	38.44	46.89
EES07307	Sorghum	vacuole	36.84	45.83
EES13257	Sorghum	extracellular	36.68	45.82
EES12225	Sorghum	plastid	36.84	44.85
EES13778	Sorghum	extracellular	36.84	44.68
EES05890	Sorghum	vacuole	34.13	43.06
OQU89810	Sorghum	extracellular, plastid, vacuole	36.36	40.79
EER89549	Sorghum	mitochondrion	36.52	40.75
EES07289	Sorghum	mitochondrion	46.73	38.65

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:8055751
UniProt:C5YUQ8	InterPro:CBM_49	ncoils:Coil	EnsemblPlants:EES19222	ProteinID:EES19222	ProteinID:EES19222.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:IPR012341	PFAM:PF00759
PFAM:PF09478	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46	MetaCyc:PWY-6788	SMART:SM01063	EnsemblPlantsGene:SORBI_3009G079900
SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0001A887A8	RefSeq:XP_002440792.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:10723979..10726706

Molecular Weight (calculated)

68750.9 Da

IEP (calculated)

8.524

GRAVY (calculated)

-0.303

Length

627 amino acids

Sequence
(BLAST)

001: MAMNVIALLG LLAVASVVRT ASGAGGHDYA SALKKTILYF EAQRSGVLPP NQRVTWRGNS GLFDGKANGV DLVGGYYDAG DNVKFGLPMA FTVTMMSWGI
101: LEYGRQMAAA GELRNAMDAV KWGTDYFIKA HPEPEVLYGE VGDGDTDHSC WQRPEDMSTS RQSFRIDPQN PGSDLAGETA AAMAAASLVF RNTYPGYANL
201: LLEHAKQLFQ FADKYRGKYD ASIPVARNYY GSFSGYGDEL LWAAAWLYEA TEEGCYLEYL ARNGDALGGT GWSINQFGWD VKYPGVQVLA AKFLLQGRAG
301: AHAAALQRYR QNAEFFVCSC VGKGAVNVPR TPGGVMYHQR WNNLQFVTSA SFLLTVYADY ATALPGSSGG AVRCPAGAAR PFEILAFVRS QVNYILGDNP
401: RGTSYMVGYG GSFPRQVHHR GASIVSVRTD PSFVSCQEGY SAWYPRQAGN PNVLEGAIVG GPDEYDDFAD ERNNYEQTEA ATYNSAPLLG VLARLAGACG
501: TGLEEYQLPP PEAAANETSS PSHRRRHHAP SSSPIEIEQN VTRTWARRRT TYYRYSVTVT NRSRKTVREL HLGVSELRGR LWGLDRARYG YVPPKWLPAL
601: RAGKSLRFVY VQHGTPANVW VTGYKLL

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.