Factsheet for Os05t0212300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 1
nucleus 1
extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	83.78	85.0
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	83.62	84.84
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	83.47	84.54
HORVU1Hr1G085830.2	Barley	vacuole	82.67	83.33
EES19222	Sorghum	vacuole	81.72	81.98
Zm00001d010446_P001	Maize	vacuole	80.6	81.38
Os01t0220100-01	Rice	extracellular, vacuole	69.95	68.75
Os01t0219600-00	Rice	mitochondrion	68.04	66.88
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	60.57	65.13
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	62.32	62.32
PGSC0003DMT400012809	Potato	extracellular, vacuole	53.26	62.04
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	61.37	61.76
KRH60035	Soybean	nucleus	61.05	61.54
KRH41305	Soybean	nucleus	61.05	61.44
Solyc08g082250.2.1	Tomato	extracellular	60.89	61.28
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	59.46	60.32
CDY47849	Canola	extracellular, vacuole	59.46	60.32
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	59.3	60.06
CDY46529	Canola	extracellular, vacuole	59.14	59.9
Bra027735.1-P	Field mustard	extracellular, vacuole	58.98	59.84
CDX90780	Canola	endoplasmic reticulum, extracellular	58.66	58.95
CDY05130	Canola	extracellular, vacuole	58.51	58.79
AT4G11050.1	Thale cress	vacuole	58.03	58.31
Solyc12g055970.1.1	Tomato	cytosol, nucleus	40.54	55.19
Os09t0394300-01	Rice	extracellular, vacuole	38.16	54.42
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	45.63	53.75
Os02t0738600-01	Rice	mitochondrion	47.22	53.71
Os08t0425300-00	Rice	extracellular	45.15	53.69
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	35.61	53.08
Os06t0247900-01	Rice	cytosol	37.04	50.98
Os01t0312800-01	Rice	extracellular	39.11	49.3
Os02t0123700-01	Rice	extracellular	38.63	48.31
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	38.0	48.09
Os02t0733300-01	Rice	extracellular	38.31	47.44
Os04t0443300-00	Rice	vacuole	37.68	47.4
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	37.52	46.09
Os04t0674800-01	Rice	extracellular	45.79	46.08
Os09t0530200-01	Rice	mitochondrion	36.88	45.05
Os08t0114200-01	Rice	plastid	37.36	44.93
Os08t0387400-01	Rice	extracellular	35.61	43.41
Os02t0778600-01	Rice	plasma membrane	34.5	43.31

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	ProteinID:AAT44235.1
EMBL:AK063458	ProteinID:BAF16834.1	ProteinID:BAS92803.1	InterPro:CBM_49	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246	GO:GO:0071555	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	EnsemblPlantsGene:Os05g0212300	EnsemblPlants:Os05t0212300-01	PFAM:PF00759	PFAM:PF09478
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46	UniProt:Q6L4I2	SMART:SM01063	SUPFAM:SSF48208
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00003A92B4	SEG:seg	:	:

Description

glycoside hydrolase OsGH9C4Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os05t0212300-01)

Coordinates

chr5:-:6941895..6944592

Molecular Weight (calculated)

68667.9 Da

IEP (calculated)

8.281

GRAVY (calculated)

-0.245

Length

629 amino acids

Sequence
(BLAST)

001: MAKNGGAHGA ATLFGLLALA SMVKLGFVAG GGHDYAMALR KSILYFQAQR SGVLPPNQRV SWRASSGLFD GKANGVDLVG GYYDAGDNVK FGLPMAFTVT
101: MMSWSILEYG KQMAAAGELR NAMDAVKWGT DYFIKAHPEP DVLYGEVGDG DTDHSCWQRP EDMTTSRQAF RVDPQHPGSD LAAETAAAMA AASIVFRGTY
201: PGYANLLLVH SKQLFEFADK YRGKYDASIT VARNYYGSFS GYGDELLWAA AWLFEATEDR SYLEYLAGNG EALGGTGWSI NQFGWDVKYP GVQVLAAKFL
301: LQGRAGDHAA ALQRYRQNAE FFVCSCVGKG AVNVARTPGG MMYHQRWNNL QFVTSASFLL TVYADFAAIS GRGAVHCPAG AAQPFDILKF VKSQVNYILG
401: DNPRGTSYMV GYGASYPRQV HHRGASIVSI KRDPSFVSCQ EGYSSWYGRE AGNPNLLDGA VVGGPDEYDD FADERDNYEQ TEAATYNNAP LLGVLARLAA
501: SCGGLKEEEY EQETATPVVN RTSSSSSLPA TATAIGIEQN VTGTWARRRR TYYRYAVTVT NRSRGKTVRE LHLGVSGLRG RLWGLEEARY GYVPPRWLPA
601: LRPGRSLRFV YVQPAPAPAN IWVTGYKLV

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.