Factsheet for Os01t0312800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19038476
plasma membrane: 19502382

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	86.57	86.92
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	86.57	86.75
EES00659	Sorghum	vacuole	85.17	84.83
Zm00001d009097_P001	Maize	extracellular	87.17	83.65
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	87.37	83.21
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	86.77	82.16
GSMUA_Achr11P...	Banana	extracellular, vacuole	72.95	71.94
KRH69273	Soybean	extracellular, vacuole	72.95	71.79
KRH31855	Soybean	nucleus	72.34	71.49
KRH68213	Soybean	nucleus	70.14	70.0
VIT_07s0005g00740.t01	Wine grape	plastid	71.34	69.67
PGSC0003DMT400081314	Potato	extracellular	69.34	69.2
CDY22043	Canola	extracellular, vacuole	71.34	68.73
AT1G02800.1	Thale cress	extracellular, vacuole	68.94	68.66
Bra036281.1-P	Field mustard	extracellular, vacuole	71.14	68.53
AT4G02290.1	Thale cress	plastid	70.74	68.41
CDY52780	Canola	extracellular, vacuole	70.74	68.15
Solyc09g075360.2.1	Tomato	plastid	69.54	68.04
KRG96467	Soybean	extracellular, vacuole	56.51	67.79
CDX97262	Canola	vacuole	69.74	67.7
Bra018559.1-P	Field mustard	extracellular, vacuole	69.54	67.51
CDY32480	Canola	extracellular, vacuole	69.14	67.38
CDY37459	Canola	endoplasmic reticulum, extracellular	68.54	67.06
Bra032584.1-P	Field mustard	extracellular, vacuole	69.34	66.92
CDY01915	Canola	cytosol	46.29	63.64
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	58.92	59.15
Os02t0123700-01	Rice	extracellular	59.12	58.65
Os02t0733300-01	Rice	extracellular	59.32	58.27
Os08t0114200-01	Rice	plastid	59.92	57.17
Os04t0443300-00	Rice	vacuole	56.51	56.4
Os09t0530200-01	Rice	mitochondrion	58.12	56.31
Os08t0387400-01	Rice	extracellular	47.29	45.74
Os02t0778600-01	Rice	plasma membrane	45.29	45.11
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	45.29	44.14
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	46.29	43.26
Os08t0425300-00	Rice	extracellular	45.69	43.1
Os02t0738600-01	Rice	mitochondrion	47.49	42.86
Os09t0394300-01	Rice	extracellular, vacuole	35.67	40.36
Os01t0219600-00	Rice	mitochondrion	51.3	40.0
Os06t0247900-01	Rice	cytosol	36.27	39.61
Os05t0212300-01	Rice	extracellular, vacuole	49.3	39.11
Os01t0220100-01	Rice	extracellular, vacuole	49.9	38.91
Os04t0674800-01	Rice	extracellular	46.09	36.8

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	EntrezGene:4327286	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:AK106887	ProteinID:BAB92772.1	ProteinID:BAF04781.2	ProteinID:BAS71793.1	ProteinID:EEE54426.1	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0071555	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	EnsemblPlantsGene:Os01g0312800	EnsemblPlants:Os01t0312800-01	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF55	UniProt:Q8LQ92	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00000A8FCC	RefSeq:XP_015625766.1
SEG:seg	:	:	:	:	:

Description

glycoside hydrolase OsGH9B2Similar to CEL4=CELLULASE 4 (Fragment). (Os01t0312800-01)

Coordinates

chr1:+:11756949..11759565

Molecular Weight (calculated)

54429.6 Da

IEP (calculated)

8.705

GRAVY (calculated)

-0.180

Length

499 amino acids

Sequence
(BLAST)

001: MALLRCLFLL AVLLPHRNAA VVAAASPHHG PAPHDYRDAL TKSILFFEGQ RSGKLPPSQR VSWRGDSGLS DGSSIKVDLV GGYYDAGDNM KFGFPLAFSM
101: TMLAWSVVEF GGLMKGELQH ARDAVRWGSD YLLKATAHPD TVYVQVGDAN RDHACWERPE DMDTPRTVYK VDPSTPGTDV AAETAAALAA ASLVFRKSDP
201: AYASRLVARA KRVFEFADKH RGTYSTRLSP YVCPYYCSYS GYQDELLWGA AWLHRATKNP TYLSYIQMNG QVLGADEQDN TFGWDNKHAG ARILIAKAFL
301: VQKVAALHEY KGHADSFICS MVPGTPTDQT QYTRGGLLFK LSDSNMQYVT SSSFLLLTYA KYLAFSKTTV SCGGAAVTPA RLRAIARQQV DYLLGSNPMG
401: MSYMVGYGAK YPRRIHHRAS SLPSVAAHPA RIGCSQGFTA LYSGVANPNV LVGAVVGGPN LQDQFPDQRS DHEHSEPATY INAPLVGALA YLAHSYGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.