Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G368000.1 | Wheat | extracellular | 79.44 | 79.76 |
| TraesCS6A01G337300.1 | Wheat | mitochondrion | 79.64 | 78.7 |
| EES05890 | Sorghum | vacuole | 78.04 | 78.67 |
| TraesCS6D01G318100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 79.24 | 78.15 |
| HORVU6Hr1G081500.1 | Barley | plastid | 81.24 | 78.12 |
| VIT_04s0008g02020.t01 | Wine grape | vacuole | 63.07 | 65.02 |
| Bra034983.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 56.69 | 64.25 |
| GSMUA_Achr6P22750_001 | Banana | vacuole | 65.87 | 63.46 |
| CDY21221 | Canola | golgi, vacuole | 61.08 | 62.96 |
| CDY30943 | Canola | golgi, vacuole | 61.08 | 62.96 |
| Bra019455.1-P | Field mustard | golgi, vacuole | 60.88 | 62.76 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 60.88 | 62.76 |
| CDX87948 | Canola | extracellular, vacuole | 60.68 | 62.55 |
| CDY12319 | Canola | cytosol, extracellular, vacuole | 60.68 | 62.55 |
| KRH52262 | Soybean | extracellular, vacuole | 60.08 | 62.32 |
| KRH52260 | Soybean | extracellular, vacuole | 59.88 | 62.11 |
| VIT_04s0008g02010.t01 | Wine grape | vacuole | 60.48 | 61.96 |
| PGSC0003DMT400052749 | Potato | extracellular, vacuole | 59.88 | 61.73 |
| Solyc06g066120.2.1 | Tomato | extracellular, vacuole | 58.48 | 60.29 |
| Os01t0312800-01 | Rice | extracellular | 45.11 | 45.29 |
| Os02t0123700-01 | Rice | extracellular | 45.31 | 45.13 |
| Os08t0114200-01 | Rice | plastid | 46.51 | 44.55 |
| Os08t0387400-01 | Rice | extracellular | 44.71 | 43.41 |
| Os02t0733300-01 | Rice | extracellular | 43.51 | 42.91 |
| Os06t0256900-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 42.12 | 42.45 |
| Os04t0443300-00 | Rice | vacuole | 42.12 | 42.2 |
| Os09t0530200-01 | Rice | mitochondrion | 42.52 | 41.36 |
| Os08t0425300-00 | Rice | extracellular | 43.11 | 40.83 |
| Os02t0151300-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 41.92 | 39.33 |
| Os02t0738600-01 | Rice | mitochondrion | 42.71 | 38.7 |
| Os05t0129200-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 39.12 | 38.28 |
| Os09t0394300-01 | Rice | extracellular, vacuole | 33.33 | 37.87 |
| Os06t0247900-01 | Rice | cytosol | 34.13 | 37.42 |
| Os04t0674800-01 | Rice | extracellular | 43.71 | 35.04 |
| Os01t0220100-01 | Rice | extracellular, vacuole | 44.31 | 34.69 |
| Os05t0212300-01 | Rice | extracellular, vacuole | 43.31 | 34.5 |
| Os01t0219600-00 | Rice | mitochondrion | 43.51 | 34.06 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | EntrezGene:4330912 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf |
| EMBL:AK100190 | EMBL:AK106971 | ProteinID:BAD19513.1 | ProteinID:BAF10211.1 | ProteinID:BAS81192.1 | ProteinID:EAZ24816.1 |
| GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 |
| InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | EnsemblPlantsGene:Os02g0778600 | EnsemblPlants:Os02t0778600-01 | PFAM:PF00759 | ScanProsite:PS00592 |
| PANTHER:PTHR22298 | PANTHER:PTHR22298:SF31 | UniProt:Q6K7G9 | SUPFAM:SSF48208 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00003758B5 | RefSeq:XP_015624767.1 | SEG:seg | : | : | : |
Description
glycoside hydrolase OsGH9B18Similar to CEL5=CELLULASE 5 (Fragment). (Os02t0778600-01)
Coordinates
chr2:+:32961965..32963974
Molecular Weight (calculated)
54543.8 Da
IEP (calculated)
8.000
GRAVY (calculated)
-0.226
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPRSSRDGH NAAAAAALLL AALVLSGDVL PAVVAGGAPS FNYKDALTKS IMFLEAQRSG KLPPTNRIKW RGDSGMEDGK LANVDLTGGY YDAGDNVKYG
101: LPLAFTVTTL AWTAMAFEKE LKAARELENV HAAIRWGTDY FLKAATKKDH LWVQVGDPNA DHQCWVRPEN MPTPRTLYQI NDKTPGSEIA AETAAAMTAS
201: SMVFRKDKPY SRRLLNKAKL LFQFAKTHQG TYDGECPFYC SYSGYNDELL WAATWLYLAT KRQVYADFIG HEAISSSVAE FSWDLKFPGA QVLLAELNMT
301: SSGGLQSFKS QADNFVCAVL PDTPFHQVSI TPGGMIHLRD GANSQYVTST AFLFVAYSDI LRRINQPVMC GAQAVQPARL LQFAKQQIDY LLGANPRGRS
401: YVVGFGVNPP TQPHHRGAST PVLPPGYQVN CGMSFSEWFT PDRPNPNELT GAIMGGPDGG DNFSDKRGNS SCTEPCTYIN SLSIGPLAAL AIRGPNLIAT
501: Q
101: LPLAFTVTTL AWTAMAFEKE LKAARELENV HAAIRWGTDY FLKAATKKDH LWVQVGDPNA DHQCWVRPEN MPTPRTLYQI NDKTPGSEIA AETAAAMTAS
201: SMVFRKDKPY SRRLLNKAKL LFQFAKTHQG TYDGECPFYC SYSGYNDELL WAATWLYLAT KRQVYADFIG HEAISSSVAE FSWDLKFPGA QVLLAELNMT
301: SSGGLQSFKS QADNFVCAVL PDTPFHQVSI TPGGMIHLRD GANSQYVTST AFLFVAYSDI LRRINQPVMC GAQAVQPARL LQFAKQQIDY LLGANPRGRS
401: YVVGFGVNPP TQPHHRGAST PVLPPGYQVN CGMSFSEWFT PDRPNPNELT GAIMGGPDGG DNFSDKRGNS SCTEPCTYIN SLSIGPLAAL AIRGPNLIAT
501: Q
001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
Arabidopsis Description
AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.