Factsheet for Solyc06g066120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 3
extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052749	Potato	extracellular, vacuole	97.12	97.12
VIT_04s0008g02020.t01	Wine grape	vacuole	69.96	69.96
VIT_04s0008g02010.t01	Wine grape	vacuole	67.49	67.08
Bra019455.1-P	Field mustard	golgi, vacuole	65.84	65.84
CDY30943	Canola	golgi, vacuole	65.84	65.84
CDY21221	Canola	golgi, vacuole	65.84	65.84
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	59.47	65.38
AT3G43860.1	Thale cress	extracellular, vacuole	65.23	65.23
CDY12319	Canola	cytosol, extracellular, vacuole	65.02	65.02
CDX87948	Canola	extracellular, vacuole	65.02	65.02
KRH52262	Soybean	extracellular, vacuole	64.2	64.6
KRH52260	Soybean	extracellular, vacuole	63.99	64.39
GSMUA_Achr6P22750_001	Banana	vacuole	66.46	62.12
Os02t0778600-01	Rice	plasma membrane	60.29	58.48
EES05890	Sorghum	vacuole	59.26	57.95
TraesCS6B01G368000.1	Wheat	extracellular	58.85	57.31
TraesCS6A01G337300.1	Wheat	mitochondrion	59.05	56.61
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	59.05	56.5
HORVU6Hr1G081500.1	Barley	plastid	58.64	54.7
Solyc08g083210.2.1	Tomato	extracellular, vacuole	47.12	46.08
Solyc09g010210.2.1	Tomato	plastid	46.09	45.81
Solyc05g052530.1.1	Tomato	extracellular	45.47	45.47
Solyc11g040340.1.1	Tomato	extracellular, vacuole	44.03	44.68
Solyc09g075360.2.1	Tomato	plastid	46.5	44.31
Solyc08g081620.2.1	Tomato	extracellular	45.27	43.91
Solyc07g049300.2.1	Tomato	extracellular, vacuole	45.06	43.54
Solyc01g110340.2.1	Tomato	extracellular, vacuole	44.03	43.15
Solyc03g083820.1.1	Tomato	plastid	43.0	41.97
Solyc07g064870.2.1	Tomato	mitochondrion	43.62	39.77
Solyc08g082250.2.1	Tomato	extracellular	46.91	36.48
Solyc02g014220.2.1	Tomato	extracellular	44.24	34.02
Solyc12g055970.1.1	Tomato	cytosol, nucleus	27.78	29.22

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:K4C7P0	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF31
SUPFAM:SSF48208	EnsemblPlantsGene:Solyc06g066120.2	EnsemblPlants:Solyc06g066120.2.1	UniParc:UPI0002765BA1	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:41448182..41451395

Molecular Weight (calculated)

54122.9 Da

IEP (calculated)

8.569

GRAVY (calculated)

-0.401

Length

486 amino acids

Sequence
(BLAST)

001: MNTNISILKA FRTFVVAWFI IFEGVHGDIN YQEALTKSLI FLEAQRSGKL PPNHRPSWRG DSALQDGKSA NVDLVGGYYD AGDNVKYGLP MAFTITTLAW
101: AAIAYHSQLQ SAGELENVRS AIKWGTDYFL KASVKRNCLY VQVGDPVKDH ECWTRPENMK TPRTVLMIDQ KNPGTEIAAE TSAAMAAASI VFRGTDLSYS
201: RKLLNKAKQL FQFGKSYKGT YDGECPFYCS FSGFHDELLW AATWLYRATK RPTYLEFITE EATTATVAEF SWDLKYAGAQ ILLSKFYFEG EKDLANFKQQ
301: ADGFICSNHP QSPHHQVHMS PGGLIHLRDG ANSQYVTGAA FLFSAYSDYL AKYKQTVSCG DKKFNSADLM AFAKQQMDYL LGKNPRGKSY MVGFGNKPPT
401: QAHHRGSSVP QMSPNKLVDC SMSFVNWYNT EKPNANELTG AIVGGPDKND NFEDRRSSSS MTEPTTYTNS LAVGVLAKLT KHHSSS

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.