Factsheet for Solyc08g083210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031897	Potato	endoplasmic reticulum, extracellular	95.98	95.78
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	80.08	80.73
KRG97785	Soybean	extracellular	74.45	73.41
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	64.59	71.65
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	64.99	65.25
TraesCS7D01G314400.1	Wheat	vacuole	64.39	64.78
TraesCS7A01G317700.1	Wheat	extracellular	64.19	64.57
TraesCS7B01G219100.1	Wheat	extracellular	64.19	64.57
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	64.39	64.39
TraesCS5B01G169500.1	Wheat	unclear	64.19	63.93
Os02t0123700-01	Rice	extracellular	64.59	63.82
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	63.98	63.73
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.58	63.58
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.78	63.53
Os08t0114200-01	Rice	plastid	64.59	61.38
Solyc09g075360.2.1	Tomato	plastid	62.98	61.37
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	64.19	60.19
EES13257	Sorghum	extracellular	60.16	59.56
EES04405	Sorghum	plasma membrane, vacuole	61.37	59.34
Zm00001d015067_P001	Maize	plasma membrane, vacuole	61.37	58.32
Solyc11g040340.1.1	Tomato	extracellular, vacuole	55.13	57.2
Zm00001d035082_P001	Maize	extracellular	57.55	57.09
Solyc01g110340.2.1	Tomato	extracellular, vacuole	54.53	54.64
Solyc09g010210.2.1	Tomato	plastid	52.92	53.78
Solyc03g083820.1.1	Tomato	plastid	50.7	50.6
Solyc08g081620.2.1	Tomato	extracellular	50.7	50.3
Solyc07g049300.2.1	Tomato	extracellular, vacuole	48.09	47.51
Solyc05g052530.1.1	Tomato	extracellular	46.28	47.33
Solyc06g066120.2.1	Tomato	extracellular, vacuole	46.08	47.12
Solyc07g064870.2.1	Tomato	mitochondrion	45.27	42.21
Solyc08g082250.2.1	Tomato	extracellular	47.28	37.6
Solyc02g014220.2.1	Tomato	extracellular	44.67	35.13
Solyc12g055970.1.1	Tomato	cytosol, nucleus	27.36	29.44

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:K4CPW5	PFAM:PF00759
ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF32	SUPFAM:SSF48208	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc08g083210.2	EnsemblPlants:Solyc08g083210.2.1	UniParc:UPI000276ACEB	SEG:seg	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:K4CPW5]

Coordinates

chr8:+:65745732..65747828

Molecular Weight (calculated)

54408.2 Da

IEP (calculated)

6.444

GRAVY (calculated)

-0.375

Length

497 amino acids

Sequence
(BLAST)

001: MAHAHANKAS LNMLMLCFTL LNLSHNFAFA FTSQDYSNAL DKSIRFFEGQ RSGKLPANQR LKWRADSGLS DGSGYHVDLV GGYYDAGDNV KFGLPMAFTT
101: TLLAWSVIEF GSSMHSQLNN AKAAIRWSSD YLLKAATASP DTLYVQVGDP NQDHRCWERP EDMDTPRNVY KVSPQNPGSD VAAETAAALA AASIVFKDSD
201: PSYSSSLLRT AQKVFAFADK YRGSYSDSLS SVVCPFYCSY SGYNDELLWG ASWLHRASQD SSYLAYIQSN GQTMGANDDD YSFSWDDKRP GTKIILSKDF
301: LEKSSQEFQA YKVHSDNYIC SLIPGSPSFQ AQYTPGGLLY KGSGSNLQYV TSSSFLLLTY AKYLRSNGGD VSCGSSRFPA ERLVELAKKQ VDYILGDNPA
401: KISYMVGFGD KYPLRVHHRG SSLPSVHAHP GHIGCNDGFQ SLNSGSPNPN VLIGAIVGGP DSRDNFEDDR NNYQQSEPAT YINAPLVGAL AFLSAPN

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.