Factsheet for Solyc05g052530.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069884	Potato	extracellular, vacuole	89.09	90.4
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	63.58	63.98
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	61.32	62.08
Bra004846.1-P	Field mustard	nucleus	58.02	60.0
CDX74667	Canola	extracellular, vacuole	53.09	59.58
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	59.88	59.39
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	54.73	59.24
AT2G44560.1	Thale cress	extracellular, vacuole	59.26	58.66
AT2G44570.1	Thale cress	extracellular	59.26	58.54
AT2G44540.1	Thale cress	vacuole	59.05	58.45
CDY47674	Canola	extracellular, vacuole	59.26	58.42
CDX74668	Canola	extracellular	58.85	58.01
KRG89135	Soybean	extracellular	57.61	57.73
CDX74664	Canola	extracellular, vacuole	58.02	57.67
Bra004844.1-P	Field mustard	extracellular, vacuole	57.82	57.46
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	55.97	57.14
CDY47675	Canola	vacuole	57.41	57.06
CDX74666	Canola	vacuole	57.41	57.06
CDX83426	Canola	extracellular, plastid, vacuole	55.97	56.78
Bra004845.1-P	Field mustard	extracellular	57.0	56.65
CDX95605	Canola	extracellular, vacuole	56.38	54.91
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	54.12	53.67
TraesCS1D01G075100.1	Wheat	vacuole	54.12	53.67
TraesCS1A01G072100.1	Wheat	nucleus	54.12	53.67
TraesCS1A01G072300.1	Wheat	vacuole	54.53	53.64
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	53.91	53.47
HORVU1Hr1G015550.1	Barley	vacuole	53.7	53.27
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	50.82	53.23
TraesCS1D01G074800.1	Wheat	vacuole	49.38	51.72
Solyc07g049300.2.1	Tomato	extracellular, vacuole	51.65	49.9
KXG21209	Sorghum	cytosol	39.92	49.87
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	50.0	47.46
Zm00001d035442_P001	Maize	extracellular, vacuole	40.53	47.24
Solyc01g110340.2.1	Tomato	extracellular, vacuole	47.94	46.98
Solyc09g010210.2.1	Tomato	plastid	46.71	46.42
Solyc08g083210.2.1	Tomato	extracellular, vacuole	47.33	46.28
Solyc07g064870.2.1	Tomato	mitochondrion	50.62	46.15
Solyc08g081620.2.1	Tomato	extracellular	47.33	45.91
Solyc06g066120.2.1	Tomato	extracellular, vacuole	45.47	45.47
Solyc09g075360.2.1	Tomato	plastid	47.53	45.29
Solyc11g040340.1.1	Tomato	extracellular, vacuole	44.44	45.09
Solyc03g083820.1.1	Tomato	plastid	43.21	42.17
Solyc08g082250.2.1	Tomato	extracellular	52.47	40.8
Solyc02g014220.2.1	Tomato	extracellular	51.65	39.72
Solyc12g055970.1.1	Tomato	cytosol, nucleus	31.07	32.68

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:K4C1T4	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12
SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g052530.1	EnsemblPlants:Solyc05g052530.1.1	TMHMM:TMhelix	UniParc:UPI0002765D19
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:62756966..62761475

Molecular Weight (calculated)

53962.1 Da

IEP (calculated)

5.479

GRAVY (calculated)

-0.399

Length

486 amino acids

Sequence
(BLAST)

001: MASTNNFMLG FCLMILFVNA ASIDYGEALT KSLLYFEAQR SGKLPHNQRV QWRGDSALQD GKDDGIDLTG GYYDAGDNVK FGFPMAFTTT LLAWSAIEFE
101: SQLNSKTELK NTLNAIKWGT DYFIKAHKES HILYGEIGEG TSDHKCWERP EDMTTPRSVY KIDEQHPGAD LAGETAAALT AAAVAFKKSD SSYSNHLLTH
201: AKELFDFAIK FPGVYSNSIP EARIFYGSSG YEDELLWAAA WLYKATKEQT YLDYINEKST SCGGTRLNLS WDDKYIGAQV LIAKDLLENK FAGNESTSLN
301: EYKKYAEEFI CNCIQKGNNN IKTTNGGLLW WGYWNNLQFV TTTTFVITAY ADTLSATKNS LQCSSGNVEP SELISFVKFQ VDYILGENPQ KMSYMVGFGT
401: HYPQKVHHRG ASIVSIKKDK KTVGCQEGFD QWFKRNAPNP NDLVGAIVGG PDNSDQYNDS RDNFKQGEAA TANSAALVGV LARLAS

Best Arabidopsis Sequence Match ( AT2G44550.1 )
(BLAST)

001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF

Arabidopsis Description

AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.