Factsheet for VIT_13s0067g01200.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	75.83	75.36
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	58.54	62.58
PGSC0003DMT400069884	Potato	extracellular, vacuole	62.29	62.42
Solyc05g052530.1.1	Tomato	extracellular	62.08	61.32
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	62.5	61.22
AT2G44540.1	Thale cress	vacuole	61.67	60.29
AT2G44560.1	Thale cress	extracellular, vacuole	61.46	60.08
Bra004846.1-P	Field mustard	nucleus	58.12	59.36
CDX74667	Canola	extracellular, vacuole	53.54	59.35
AT2G44570.1	Thale cress	extracellular	60.83	59.35
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	58.33	58.82
CDX83426	Canola	extracellular, plastid, vacuole	58.33	58.46
CDX74666	Canola	vacuole	59.38	58.28
CDY47675	Canola	vacuole	59.38	58.28
Bra004845.1-P	Field mustard	extracellular	59.17	58.08
CDX74668	Canola	extracellular	59.38	57.81
KRG89135	Soybean	extracellular	58.12	57.53
CDX74664	Canola	extracellular, vacuole	58.54	57.46
Bra004844.1-P	Field mustard	extracellular, vacuole	58.54	57.46
CDY47674	Canola	extracellular, vacuole	58.96	57.4
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	57.08	55.92
TraesCS1D01G075100.1	Wheat	vacuole	56.88	55.71
TraesCS1A01G072100.1	Wheat	nucleus	56.88	55.71
CDX95605	Canola	extracellular, vacuole	57.71	55.51
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	56.46	55.31
HORVU1Hr1G015550.1	Barley	vacuole	56.25	55.1
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	53.12	54.96
TraesCS1A01G072300.1	Wheat	vacuole	56.46	54.86
KXG21209	Sorghum	cytosol	43.96	54.24
TraesCS1D01G074800.1	Wheat	vacuole	51.88	53.66
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	55.83	52.34
Zm00001d035442_P001	Maize	extracellular, vacuole	44.79	51.56
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	53.96	50.78
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	53.75	49.52
VIT_07s0005g00740.t01	Wine grape	plastid	49.58	46.58
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	47.08	45.84
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	46.88	45.55
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	47.29	45.13
VIT_04s0008g02020.t01	Wine grape	vacuole	45.42	44.86
VIT_04s0008g02010.t01	Wine grape	vacuole	45.62	44.79
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	58.54	44.67
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	45.21	43.84
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	54.79	42.76
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	44.17	42.48

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100246784	wikigene:100246784	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	ProteinID:CCB49855	ProteinID:CCB49855.1	UniProt:F6HCB7	EMBL:FN595514	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	EntrezGene:LOC100246784	wikigene:LOC100246784	PFAM:PF00759	PANTHER:PTHR22298
PANTHER:PTHR22298:SF12	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00015CA415	ArrayExpress:VIT_13s0067g01200	EnsemblPlantsGene:VIT_13s0067g01200
EnsemblPlants:VIT_13s0067g01200.t01	RefSeq:XP_002272408	RefSeq:XP_002272408.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr13:+:670695..673012

Molecular Weight (calculated)

52929.9 Da

IEP (calculated)

7.060

GRAVY (calculated)

-0.374

Length

480 amino acids

Sequence
(BLAST)

001: MSPKTLLPLG FSLLLLLQGA ASSNYGAALT KSLLYFEAQR SGKLPPNQRV LWRGDSALQD GNDAGVDLVG GYYDAGDNVK FGFPHAFTVT LLSWGVIEYG
101: QQLAAKKELG HAMEAIKWGT DYFIKAHTQP NVLYGQVGDG DADHACWERP EDMTTPRTSY KIDGQHPGSD LAGETAAAFA AASMAFSKSD PSYSSQLLSH
201: GKQLFDFAKT HQGLYQNSIP QAKFYASSGF EDELVWAAAW LYRATNDQTY VNYLGSANTG GTRSEFSWDD KYTGAQVLVA KFIMEGRLPS TDNWVNYKSH
301: AEQFICNTVQ KGYNNVKMTR GGALWWLSWN NVQYTTSALL LTISYADWLN AARSNLNCPN GQVSPDQLIA FARLQVDYIL GRNPRGMSYM LGYGARFPQQ
401: LHHRGSSIVS IKKDKRLVTC TGGYTEWFNR QAPNPNIVYG AIAGGPDQYD NYNDSRPNYE QAESATVNTA PFVGVLARLA

Best Arabidopsis Sequence Match ( AT2G44550.1 )
(BLAST)

001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF

Arabidopsis Description

AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.