Factsheet for VIT_16s0022g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 3
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23799	Soybean	extracellular, nucleus, vacuole	51.3	61.54
KRH55742	Soybean	vacuole	58.52	60.08
PGSC0003DMT400072087	Potato	golgi, vacuole	50.5	58.6
Solyc03g083820.1.1	Tomato	plastid	58.12	58.23
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	53.51	53.94
GSMUA_Achr11P...	Banana	cytosol	51.7	52.65
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	51.7	52.33
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	50.9	51.42
VIT_07s0005g00740.t01	Wine grape	plastid	51.7	50.49
GSMUA_Achr11P...	Banana	vacuole	49.9	49.8
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	46.49	46.12
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	42.48	44.17
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	42.08	43.48
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	42.89	41.96
VIT_04s0008g02020.t01	Wine grape	vacuole	39.08	40.12
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	41.68	39.92
VIT_04s0008g02010.t01	Wine grape	vacuole	38.88	39.67
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	45.69	36.25
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	40.48	32.85

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100267334	wikigene:100267334	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	ProteinID:CCB49320	ProteinID:CCB49320.1	UniProt:F6HAN7	EMBL:FN595506	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EntrezGene:LOC100267334	wikigene:LOC100267334	PFAM:PF00759
ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF45	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0001985E16
ArrayExpress:VIT_16s0022g00750	EnsemblPlantsGene:VIT_16s0022g00750	EnsemblPlants:VIT_16s0022g00750.t01	RefSeq:XP_002264710	RefSeq:XP_002264710.2	SEG:seg

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:F6HAN7]

Coordinates

chr16:+:12176866..12181893

Molecular Weight (calculated)

54502.9 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.233

Length

499 amino acids

Sequence
(BLAST)

001: MEMGGGKMIG VMMVMTMVVS VSSQDYGDAL TKSILFFEGQ RSGKLPSSQR VNWRKDSGVN DGKDVKVDLT GGYYDAGDNV KFNFPMAFTT TLLAWSVIEF
101: GQFMDPDLQN ALDAVRWGTD YLLKATTTPG TVIALVGDPF GDHYCWERPE DMDTPRTTYE VNTTSPGSEV SAEIAAALAA ASIAFNASDS QYSQTLVTRA
201: ISVFDFADKN RGSYNDAIGR VVCPYYYCDG SGYMDELGWG AAWLYKATNN ESYWNYVQYT INNLPKYIKV MDTDGTLSYR DNFAEFGWDT KVAGINVLVS
301: GWVLQEKLDA SPFVLDADRF VCTILPESPT KSVTYSPGGL LFKSGPSNMQ HATTLSFLLV VYAGYSKGNG RQIQCGNVVV SPDRLVEVSK SQVNYILGNN
401: PLGMSYMVGY GDKFPNRIHH RGSSLPSMDA HPDRIDCNGG TPYFQTQDPN PNLLTGAVVG GPAPDDSYAD SRADVSQSEP ATYINAPLVG LLAYFKANS

Best Arabidopsis Sequence Match ( AT1G70710.1 )
(BLAST)

001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR

Arabidopsis Description

CEL1Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.