Factsheet for VIT_19s0090g01050.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	74.9	73.32
KRH73794	Soybean	vacuole	73.92	73.2
PGSC0003DMT400057164	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.41	71.46
KRH14332	Soybean	vacuole	73.53	70.49
Solyc07g064870.2.1	Tomato	mitochondrion	70.2	67.17
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	50.78	53.96
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	48.82	51.55
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	57.06	47.32
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	45.69	47.26
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	58.04	47.06
VIT_07s0005g00740.t01	Wine grape	plastid	46.08	45.99
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	43.33	44.65
VIT_04s0008g02010.t01	Wine grape	vacuole	42.55	44.38
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	43.73	44.33
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	42.75	44.13
VIT_04s0008g02020.t01	Wine grape	vacuole	41.57	43.62
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	41.96	42.89

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100262347	wikigene:100262347	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	ProteinID:CCB50690	ProteinID:CCB50690.1	UniProt:F6HES8	EMBL:FN595751	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EntrezGene:LOC100262347	wikigene:LOC100262347	PFAM:PF00759
ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF96	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000210A132
ArrayExpress:VIT_19s0090g01050	EnsemblPlantsGene:VIT_19s0090g01050	EnsemblPlants:VIT_19s0090g01050.t01	RefSeq:XP_002277353	RefSeq:XP_002277353.2	SEG:seg

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:F6HES8]

Coordinates

chr19:-:7136387..7138873

Molecular Weight (calculated)

57343.3 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.371

Length

510 amino acids

Sequence
(BLAST)

001: MKKHAPPQHC FPLLSIFFAI IPFSSSFDYH QALSNSLLYF ETQRSGRLPH NQRVTWRDHS GLTDGLEQGV DLVGGYYDAG DNVKFGLPMA FTVTMLSWGV
101: IEYGQYMASA GEYGHALEAI KWGTDYFIKA HTQPNVLWVQ VGDGDTDHYC WQRPEDMTTS RQAYKIDETN PGSEVAGETA AAMAAASIVF RKTNPHYSQL
201: LLHHAQQLFE FGDKYRGKYD KSVGVVSSYY PSVSGYQDEL LWAALWLYRA TDNQSYLNYV LQNALSFGGI TWAISEFSWD VKYAGLQIIA SMLLREEKNK
301: VHKPTLEQYL SKAQHYLCAC LHKNNGSNVD RTPGGLLYTR QWNNMQYVSN AAFLLTVYSD HLREANQQLN CHGELVGPEE ILSFAKSQVD YILGANPMAM
401: SYLVGYGPKY PTKVHHRGSS TESYKHDKGF IGCTQGYDGW YARPHPNPHV LVGALVGGPD VNDRFRDDRG NYVQTEACTY NTAPLVGVFA KLFGLESTEF
501: SSNPSLISSW

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.