Factsheet for VIT_02s0025g02650.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g083210.2.1	Tomato	extracellular, vacuole	80.73	80.08
PGSC0003DMT400031897	Potato	endoplasmic reticulum, extracellular	80.73	79.92
KRG97785	Soybean	extracellular	77.28	75.6
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.94	73.66
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	67.55	67.27
TraesCS7D01G314400.1	Wheat	vacuole	67.14	67.0
TraesCS7B01G219100.1	Wheat	extracellular	66.53	66.4
TraesCS7A01G317700.1	Wheat	extracellular	66.33	66.19
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	65.72	65.19
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	65.52	64.99
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	65.72	64.93
Os02t0123700-01	Rice	extracellular	65.92	64.61
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	65.31	64.53
TraesCS5B01G169500.1	Wheat	unclear	65.31	64.53
Os08t0114200-01	Rice	plastid	66.33	62.52
EES13257	Sorghum	extracellular	62.07	60.96
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	65.52	60.94
EES04405	Sorghum	plasma membrane, vacuole	63.49	60.89
VIT_07s0005g00740.t01	Wine grape	plastid	62.47	60.27
Zm00001d015067_P001	Maize	plasma membrane, vacuole	63.69	60.04
Zm00001d035082_P001	Maize	extracellular	59.63	58.68
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	56.39	56.16
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	55.98	55.87
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	52.33	51.7
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	47.67	48.65
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	49.09	48.11
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	45.84	47.08
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	47.26	45.69
VIT_04s0008g02010.t01	Wine grape	vacuole	44.42	44.79
VIT_04s0008g02020.t01	Wine grape	vacuole	43.81	44.44
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	45.23	42.8
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	50.1	39.27
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	46.04	36.91

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100232903	wikigene:100232903	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	ProteinID:AAK81878	ProteinID:AAK81878.1	EMBL:AY043235	ProteinID:CCB58300	ProteinID:CCB58300.1
UniProt:F6HU77	EMBL:FN596251	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	EntrezGene:LOC100232903	wikigene:LOC100232903	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698
PFscan:PS51257	PANTHER:PTHR22298	PANTHER:PTHR22298:SF32	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002109BA6	ArrayExpress:VIT_02s0025g02650	EnsemblPlantsGene:VIT_02s0025g02650	EnsemblPlants:VIT_02s0025g02650.t01	unigene:Vvi.13	RefSeq:XP_002279780
RefSeq:XP_002279780.2	SEG:seg	:	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:F6HU77]

Coordinates

chr2:+:2313293..2315285

Molecular Weight (calculated)

53948.9 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.282

Length

493 amino acids

Sequence
(BLAST)

001: MASATKYSMV MQILSLILCL LTLSCSAFTS KDYADALAKS ILFYEGQRSG KLPSSQRLTW RGDSGLSDGS SYHVDLVGGY YDAGDNVKFG LPMAFTTTLL
101: AWSVIEFGNS MPSQIGNARA AIRWSTDYLL KAATATPGTL YVQVGDPNMD HKCWERPEDM DTPRNVYKVS KQNPGSDVAA ETAAALAAAS IVFKDSDPSY
201: STKLLQTAMK VFDFADSYRG SYSDSLSSVV CPFYCSYSGY HDELLWGASW IHRASNNASY LAYIQSNGQT MGADDDDYSF SWDDKRAGTK VLLSKDFLEK
301: NTEEFQLYKR HSDNYICSLI PGTSSFQAQY TPGGLFYKGS ESNLQYVTST AFLLLTYAKY LSSNGGSASC GTSTVTAERL ISLAKKQVDY ILGDNPAKMS
401: YMVGFGDKYP QHVHHRGSSL PSVRTHPDHI ACSNGFQYLY SASPNPNVLV GAILGGPNNR DSFADDRNNY QQSEPATYIN APFVGALAFF SAN

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.