Factsheet for TraesCS5A01G172200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	91.7	97.79
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	90.0	95.59
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	88.3	93.79
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	87.92	93.76
Os02t0123700-01	Rice	extracellular	73.96	77.93
EES04405	Sorghum	plasma membrane, vacuole	71.13	73.35
Zm00001d015067_P001	Maize	plasma membrane, vacuole	70.94	71.89
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.98	67.41
TraesCS7A01G317700.1	Wheat	extracellular	62.45	67.0
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	60.94	65.52
Solyc08g083210.2.1	Tomato	extracellular, vacuole	60.19	64.19
PGSC0003DMT400031897	Potato	endoplasmic reticulum, extracellular	60.19	64.06
KRG97785	Soybean	extracellular	57.74	60.71
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	55.85	56.17
TraesCS6A01G093200.1	Wheat	golgi	50.57	53.92
TraesCS7A01G204500.1	Wheat	extracellular	50.57	53.28
TraesCS6A01G295300.1	Wheat	extracellular	49.25	52.62
TraesCS5A01G317400.1	Wheat	plastid	49.81	51.76
TraesCS2A01G310200.1	Wheat	vacuole	48.3	50.69
TraesCS1A01G072100.1	Wheat	nucleus	45.66	49.39
TraesCS1A01G072300.1	Wheat	vacuole	45.09	48.38
TraesCS1A01G088700.1	Wheat	extracellular	46.04	48.22
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.53	45.83
TraesCS7A01G144700.1	Wheat	vacuole	44.53	45.56
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	35.85	45.45
TraesCS6A01G312400.1	Wheat	vacuole	45.28	44.53
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.02	43.1
TraesCS5A01G202600.1	Wheat	vacuole	43.58	43.1
TraesCS6A01G337300.1	Wheat	mitochondrion	40.57	42.41
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	44.53	40.48
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	46.04	39.29
TraesCS2A01G556300.1	Wheat	vacuole	46.04	37.83
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	43.77	36.83

Protein Annotations

EnsemblPlants:TraesCS5A01G172200.1	EnsemblPlantsGene:TraesCS5A01G172200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:6-hairpin_glycosidase_sf	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS
InterPro:Glyco_hydro_9_His_AS	KEGG:00500+3.2.1.4	PANTHER:PTHR22298	PANTHER:PTHR22298:SF32	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF48208	MapMan:35.1	:

Description

No Description!

Coordinates

chr5A:+:365599426..365601348

Molecular Weight (calculated)

57233.2 Da

IEP (calculated)

6.884

GRAVY (calculated)

-0.167

Length

530 amino acids

Sequence
(BLAST)

001: MGSPKACMST YLIAVLCLVT GARSAAAFNY ADALDKAVLF FEAQRSGKLP PGQRVAWRAD SALSDGNASN VRTYSDDKSW THAMPLPCMS STRVYPLMCA
101: FDQVDLVGGY YDAGDNVKFG LPMAFTVTML SWSVVEFGGA MPPGQLANAE AAVRWGSDYL LKAATATPGA LWVQVADPYQ DHRCWERPED MDTPRAAYKV
201: TPQNPGSDVA GETAAALAAA SLVFRARDPA YSSKLLRAAR QVFDFADRYR GSYIDSLSSV VCPFYCSYSG YKDELLWAAT WLHLASSPSP SSQSVYLTYI
301: NSNGHTLGGE QDAYTVSWDD KRAATKVLLS KVFLQNRVES LRTYKAHADK YICSLVPGAG GFQSQYTPGG LLFTERDSNM EYVTSTTFLL LTYAKYLSST
401: GGAASCGSTA VTPSTLVSLA KKQVDYILGA NPAGMSYMVG FGARYPRRVH HRGASMPSVR DHPARIGCDE GFHYLHSSDP DRNVLVGAVV GGPDQSDSYS
501: DSRDNYAQAE PSTYTNAPLV GALAFFAGAH

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.