Factsheet for TraesCS1A01G360700.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	93.36	98.8
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	92.79	98.39
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	93.93	94.47
Os01t0312800-01	Rice	extracellular	82.16	86.77
EES00659	Sorghum	vacuole	77.99	82.04
Zm00001d009097_P001	Maize	extracellular	79.51	80.58
GSMUA_Achr11P...	Banana	extracellular, vacuole	69.83	72.73
KRH69273	Soybean	extracellular, vacuole	68.12	70.81
KRH31855	Soybean	nucleus	67.74	70.69
KRH68213	Soybean	nucleus	66.22	69.8
VIT_07s0005g00740.t01	Wine grape	plastid	67.17	69.28
PGSC0003DMT400081314	Potato	extracellular	65.28	68.8
Solyc09g075360.2.1	Tomato	plastid	65.46	67.65
AT1G02800.1	Thale cress	extracellular, vacuole	64.14	67.47
KRG96467	Soybean	extracellular, vacuole	53.13	67.31
Bra018559.1-P	Field mustard	extracellular, vacuole	65.46	67.12
AT4G02290.1	Thale cress	plastid	65.65	67.05
CDY22043	Canola	extracellular, vacuole	65.84	66.99
CDX97262	Canola	vacuole	65.28	66.93
Bra036281.1-P	Field mustard	extracellular, vacuole	65.65	66.8
CDY52780	Canola	extracellular, vacuole	65.46	66.6
CDY32480	Canola	extracellular, vacuole	64.14	66.02
CDY37459	Canola	endoplasmic reticulum, extracellular	63.57	65.69
Bra032584.1-P	Field mustard	extracellular, vacuole	64.33	65.57
CDY01915	Canola	cytosol	43.64	63.36
TraesCS7A01G317700.1	Wheat	extracellular	57.5	61.34
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	55.79	58.92
TraesCS7A01G204500.1	Wheat	extracellular	56.17	58.85
TraesCS6A01G295300.1	Wheat	extracellular	54.65	58.06
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.17	55.85
TraesCS6A01G093200.1	Wheat	golgi	52.56	55.73
TraesCS5A01G317400.1	Wheat	plastid	53.7	55.49
TraesCS2A01G310200.1	Wheat	vacuole	51.8	54.06
TraesCS1A01G088700.1	Wheat	extracellular	47.06	49.01
TraesCS1A01G072100.1	Wheat	nucleus	44.78	48.16
TraesCS1A01G072300.1	Wheat	vacuole	44.97	47.98
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.07	44.08
TraesCS6A01G337300.1	Wheat	mitochondrion	42.31	43.98
TraesCS6A01G312400.1	Wheat	vacuole	44.97	43.97
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.02	43.86
TraesCS7A01G144700.1	Wheat	vacuole	42.69	43.44
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	33.97	42.82
TraesCS5A01G202600.1	Wheat	vacuole	42.31	41.6
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	44.4	40.14
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	45.92	38.97
TraesCS2A01G556300.1	Wheat	vacuole	46.11	37.67
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	44.4	37.14

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1A01G360700	EnsemblPlants:TraesCS1A01G360700.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:541770317..541772468

Molecular Weight (calculated)

57131.9 Da

IEP (calculated)

8.883

GRAVY (calculated)

-0.150

Length

527 amino acids

Sequence
(BLAST)

001: MAAILRCCLL LALVAGLLLG NAAALPHHGP AKHDYRDALT KSILFFEGQR SGRLPPSQRV SWRRSSGLSD GSSAKASTSG PSCCISPALR FVQWLTCCWD
101: VLFQVDLTGG YYDAGDNVKF GFPLAFSSTM LAWSVLEFGG MMKGELQHAR DAVRWGADYL LKATAHPDTV YVQVGDAGKD HACWERPEDM DTPRTVYKVD
201: PSTPGSDVAA ETAAALAAAS LVFRKSDPAY SSRLVARAKR VFEFADKHRG VYSAKLSSYV CPYYCSYSGY QDELLWGAAW LHRATKSPVY LSYIKVNGQL
301: LGADEQDNTF GWDNKHAGAR ILLSKSFLVQ KLGALQEYKA HADSFICSMV PGTPTDQTTY TRGGLLFKLS DSNMQYVTSS SFLLLTYAKY LVSAKKTVSC
401: GGVAVTPQRL RAIARRQVDY LLGSNPMGMS YMVGYGAKYP KKLHHRASSL PSVAAHPGKI GCSQGFTGLY SGAANPNVHV GAVVGGPNQN DQFPDQRSDY
501: EHSEPATYIN APLVGALAYL AHSSGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.