Factsheet for TraesCS1D01G365100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	98.39	98.59
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	98.8	93.36
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	97.79	92.94
Os01t0312800-01	Rice	extracellular	86.75	86.57
EES00659	Sorghum	vacuole	82.33	81.84
Zm00001d009097_P001	Maize	extracellular	83.73	80.19
GSMUA_Achr11P...	Banana	extracellular, vacuole	73.29	72.13
KRH69273	Soybean	extracellular, vacuole	72.29	71.01
KRH31855	Soybean	nucleus	71.89	70.89
KRH68213	Soybean	nucleus	70.28	70.0
VIT_07s0005g00740.t01	Wine grape	plastid	71.29	69.47
PGSC0003DMT400081314	Potato	extracellular	68.88	68.6
KRG96467	Soybean	extracellular, vacuole	56.43	67.55
Solyc09g075360.2.1	Tomato	plastid	69.08	67.45
AT1G02800.1	Thale cress	extracellular, vacuole	67.67	67.27
AT4G02290.1	Thale cress	plastid	69.68	67.25
Bra018559.1-P	Field mustard	extracellular, vacuole	69.28	67.12
CDY22043	Canola	extracellular, vacuole	69.68	66.99
CDX97262	Canola	vacuole	69.08	66.93
Bra036281.1-P	Field mustard	extracellular, vacuole	69.48	66.8
CDY52780	Canola	extracellular, vacuole	69.28	66.6
CDY32480	Canola	extracellular, vacuole	67.87	66.02
CDY37459	Canola	endoplasmic reticulum, extracellular	67.27	65.69
Bra032584.1-P	Field mustard	extracellular, vacuole	68.07	65.57
CDY01915	Canola	cytosol	46.18	63.36
TraesCS7D01G314400.1	Wheat	vacuole	60.44	60.93
TraesCS7D01G207600.1	Wheat	extracellular	59.04	58.92
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.84	58.72
TraesCS6D01G275900.1	Wheat	extracellular	58.23	58.23
TraesCS6D01G089200.1	Wheat	golgi	50.0	57.64
TraesCS2D01G308500.1	Wheat	golgi	55.62	55.62
TraesCS5D01G323700.2	Wheat	vacuole	56.22	50.91
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	45.18	48.49
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	47.59	48.37
TraesCS1D01G090100.1	Wheat	extracellular	48.59	48.11
TraesCS1D01G075100.1	Wheat	vacuole	46.99	47.76
TraesCS1D01G074800.1	Wheat	vacuole	43.37	46.55
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.58	44.08
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	46.99	43.98
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.78	43.9
TraesCS6D01G291800.1	Wheat	vacuole	47.79	43.75
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.39	43.67
TraesCS5D01G208900.1	Wheat	vacuole	44.18	41.04
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	48.59	39.03
TraesCS2D01G557500.1	Wheat	extracellular	47.79	38.57
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	47.39	36.14

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1D01G365100	EnsemblPlants:TraesCS1D01G365100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:+:445588430..445590532

Molecular Weight (calculated)

53902.0 Da

IEP (calculated)

9.180

GRAVY (calculated)

-0.199

Length

498 amino acids

Sequence
(BLAST)

001: MAAILRCCLL LAALAGLLLG NAAALPHHGP AKHDYRDALT KSILFFEGQR SGRLPPSQRV SWRRSSGLSD GSSVKVDLTG GYYDAGDNVK FGFPLAFSST
101: MLAWSVLEFG GMMKGELQHA RDAVRWGADY LLKATAHPDT VYVQVGDAGK DHACWERPED MDTPRTVYKV DPSTPGSDVA AETAAALAAA SLVFRKSDPA
201: YSSRLVARAK RVFEFADKHR GVYSAKLSSY VCPYYCSYSG YQDELLWGAA WLHRATKSPV YLSYIKVNGQ LLGADEQDNT FGWDNKHAGS RILLSKSFLV
301: QKVGALQEYK AHADGFICSM VPGTPTDQTT YTRGGLLFKL SDSNMQYVTS SSFLLLTYAK YLVSAKKTVS CGGVAVTPQR LRAIARRQVD YLLGSNPMGM
401: SYMVGYGAKY PKKLHHRASS LPSVAAHPGK IGCSQGFTGL YSGAANPNVH VGAVVGGPNQ NDQFPDQRSD YEHSEPATYI NAPLVGALAY LAHSSGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.