Factsheet for TraesCS6D01G318100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

mitochondrion 2
vacuole 1
endoplasmic reticulum 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	endoplasmic reticulum, extracellular, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G368000.1	Wheat	extracellular	96.65	98.4
TraesCS6A01G337300.1	Wheat	mitochondrion	97.64	97.83
HORVU6Hr1G081500.1	Barley	plastid	92.32	90.02
Os02t0778600-01	Rice	plasma membrane	78.15	79.24
EES05890	Sorghum	vacuole	75.39	77.06
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	54.72	62.9
VIT_04s0008g02020.t01	Wine grape	vacuole	59.65	62.35
GSMUA_Achr6P22750_001	Banana	vacuole	63.19	61.73
CDY21221	Canola	golgi, vacuole	59.06	61.73
CDY30943	Canola	golgi, vacuole	59.06	61.73
Bra019455.1-P	Field mustard	golgi, vacuole	58.86	61.52
CDX87948	Canola	extracellular, vacuole	58.86	61.52
CDY12319	Canola	cytosol, extracellular, vacuole	58.86	61.52
KRH52262	Soybean	extracellular, vacuole	58.46	61.49
AT3G43860.1	Thale cress	extracellular, vacuole	58.66	61.32
KRH52260	Soybean	extracellular, vacuole	58.27	61.28
PGSC0003DMT400052749	Potato	extracellular, vacuole	57.48	60.08
VIT_04s0008g02010.t01	Wine grape	vacuole	57.09	59.3
Solyc06g066120.2.1	Tomato	extracellular, vacuole	56.5	59.05
TraesCS7D01G314400.1	Wheat	vacuole	43.9	45.14
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	43.9	44.78
TraesCS1D01G090100.1	Wheat	extracellular	42.72	43.14
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.73	42.48
TraesCS6D01G275900.1	Wheat	extracellular	41.54	42.37
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	38.19	41.81
TraesCS7D01G207600.1	Wheat	extracellular	40.94	41.68
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	39.96	41.43
TraesCS1D01G075100.1	Wheat	vacuole	39.96	41.43
TraesCS6D01G089200.1	Wheat	golgi	34.25	40.28
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.75	40.19
TraesCS2D01G308500.1	Wheat	golgi	39.17	39.96
TraesCS5D01G323700.2	Wheat	vacuole	43.11	39.82
TraesCS1D01G074800.1	Wheat	vacuole	36.22	39.66
TraesCS6D01G291800.1	Wheat	vacuole	42.32	39.52
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.55	38.94
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	40.75	38.91
TraesCS5D01G208900.1	Wheat	vacuole	39.17	37.13
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	44.09	34.3
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	41.34	33.87
TraesCS2D01G557500.1	Wheat	extracellular	40.94	33.71

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF31	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G318100	EnsemblPlants:TraesCS6D01G318100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:426335438..426337612

Molecular Weight (calculated)

55305.8 Da

IEP (calculated)

7.712

GRAVY (calculated)

-0.235

Length

508 amino acids

Sequence
(BLAST)

001: MKEKHTPASC RGGGGGGVRC VVALLLAALV LSGDVAGATS FNYKDALTKS ILFLEAQRSG KLPPDNRIKW RGDSGMEDGK LAHVDLTGGY YDAGDNVKYG
101: LPLAFTVTTL AWAALAFKPE LQAAGELKHV QEAIRWGTDY ILKCAAKKNH MWVQVGDPNL DHQCWVRPEN MPTPRTLYQI DGNTPGTEIA AETAAALAAS
201: AMVFRNDKNY ARRLMNKAKL LYQFAKSHLK TYDGECPFYC SYSGYNDELL WAATWLFMAT KRQVYADFIT HEAISSSVAE FSWDLKYPGA QILLAPHNMN
301: ASGGMQSYKT QADNFVCAVL PDTPFHQVFI TPGGMIHLRD GANSQYVTGT AFLFLVYADW LDTARQDVMC GATPIKPARL REFAKQQMDY LLGDNPRGRS
401: YVVGFGSNPP TQPHHRGAST PVLKPGTVVN CGMSFGDWFA PDRPNPNELT GAIMGGPDGA DNFIDKRNAS ACTEPCTYIN SLAIGALAAL AGRGPNLVAS
501: KSHGYDQM

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.