Factsheet for TraesCS5D01G323700.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G317400.1	Wheat	plastid	91.64	98.82
TraesCS5B01G318000.1	Wheat	vacuole	91.45	98.05
HORVU5Hr1G081200.5	Barley	vacuole	90.91	97.09
OQU89810	Sorghum	extracellular, plastid, vacuole	82.36	81.04
Zm00001d021280_P004	Maize	vacuole	80.55	80.55
Os09t0530200-01	Rice	mitochondrion	74.0	79.03
GSMUA_Achr1P07760_001	Banana	vacuole	68.18	74.85
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	58.36	72.95
GSMUA_Achr2P03400_001	Banana	extracellular	66.18	72.95
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	63.45	70.51
KRH60771	Soybean	extracellular, vacuole	61.64	69.04
KRH51463	Soybean	extracellular	61.45	68.42
KRH29353	Soybean	extracellular, vacuole	60.36	66.14
Solyc01g110340.2.1	Tomato	extracellular, vacuole	58.36	64.72
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	58.18	64.65
Bra011881.1-P	Field mustard	cytosol	55.45	64.21
CDY42599	Canola	cytosol	55.09	63.79
CDY41955	Canola	extracellular, vacuole	56.0	62.22
AT4G39010.1	Thale cress	extracellular, vacuole	56.18	62.17
TraesCS6D01G275900.1	Wheat	extracellular	53.82	59.44
TraesCS7D01G207600.1	Wheat	extracellular	53.27	58.72
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	50.91	56.22
CDY22399	Canola	extracellular	48.36	54.06
Bra033592.1-P	Field mustard	extracellular	48.36	54.06
TraesCS7D01G314400.1	Wheat	vacuole	48.55	54.05
CDX72723	Canola	extracellular	48.0	53.66
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.36	53.31
TraesCS6D01G089200.1	Wheat	golgi	41.82	53.24
AT4G39000.1	Thale cress	extracellular, vacuole	47.45	52.94
CDY22400	Canola	extracellular, vacuole	44.55	52.69
CDY41954	Canola	vacuole	44.73	52.68
Bra033591.1-P	Field mustard	extracellular, vacuole	46.73	52.45
Bra011882.1-P	Field mustard	extracellular	46.91	52.44
CDY42597	Canola	extracellular	44.18	52.03
TraesCS2D01G308500.1	Wheat	golgi	46.0	50.8
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	39.64	46.98
TraesCS1D01G075100.1	Wheat	vacuole	41.64	46.73
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	41.64	46.73
TraesCS1D01G090100.1	Wheat	extracellular	42.0	45.92
TraesCS1D01G074800.1	Wheat	vacuole	38.36	45.47
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.82	43.11
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.18	42.91
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	40.0	41.35
TraesCS6D01G291800.1	Wheat	vacuole	40.73	41.18
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.27	40.83
TraesCS5D01G208900.1	Wheat	vacuole	38.91	39.93
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	42.73	37.9
TraesCS2D01G557500.1	Wheat	extracellular	42.18	37.6
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	42.91	36.14

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G323700	EnsemblPlants:TraesCS5D01G323700.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:415678763..415681164

Molecular Weight (calculated)

60672.1 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.487

Length

550 amino acids

Sequence
(BLAST)

001: MASAPAHHLR VRVLLVVLCA VSASASASFP WPWKRSGHDY RDALAKCILF FEGQRSGRLP ADQRAAWRGD SGVSDGRAAG AGVDLEGGYY DAGDNVKFGF
101: PMAFTTTMLS WSVLEFGDDM PREERRHAAD AVRWGTDYLL KTLAHPGVIF MQASARARRP HCTSTACHGR ARRRTRTRVT GRSPALCMMQ VGDPWKDHEC
201: WERPEDMDTE RTVYNVSAGR PGSEVAGETA AALAAASMVF RDGDREYAEL LLDSAKKAFE FADSHRGAYS DDMDLRAGGC PFYCDFNGYQ DELLWGAAWL
301: RRASGDDTFR EYIQNNGKTL GAEDSINEFG WDNKHAGLNV LISKEFIEGE ALSMQSYKES ADSFICTLIP ESSSPHIQYT PGGMIYKPGG SNMQHVTSIS
401: FLLLTYAKYL TKSSHTVNCG DISVGPDTLR LQAKKQIDYL LGDNPMKMSY MVGYGDRYPQ RIHHRGSSLP SIKDHPERMA CKDGTPYYDS SSPNPNPLVG
501: AIVGGPGEDD AYGDDRADYR KSEPTTYINA PLVGVLAYFV GNPNPGHIRH

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.