Factsheet for TraesCS5B01G318000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G317400.1	Wheat	plastid	96.88	97.45
HORVU5Hr1G081200.5	Barley	vacuole	97.66	97.28
TraesCS5D01G323700.2	Wheat	vacuole	98.05	91.45
Os09t0530200-01	Rice	mitochondrion	79.34	79.03
OQU89810	Sorghum	extracellular, plastid, vacuole	85.58	78.53
Zm00001d021280_P004	Maize	vacuole	84.02	78.36
GSMUA_Achr1P07760_001	Banana	vacuole	72.32	74.05
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	61.99	72.27
GSMUA_Achr2P03400_001	Banana	extracellular	70.18	72.14
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	67.45	69.9
KRH60771	Soybean	extracellular, vacuole	65.89	68.84
KRH51463	Soybean	extracellular	65.5	68.02
KRH29353	Soybean	extracellular, vacuole	64.33	65.74
Solyc01g110340.2.1	Tomato	extracellular, vacuole	62.38	64.52
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	62.18	64.44
Bra011881.1-P	Field mustard	cytosol	59.06	63.79
CDY42599	Canola	cytosol	58.67	63.37
CDY41955	Canola	extracellular, vacuole	59.84	62.02
AT4G39010.1	Thale cress	extracellular, vacuole	60.04	61.97
TraesCS6B01G325400.1	Wheat	extracellular	57.7	59.68
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	54.97	56.74
TraesCS7B01G111700.1	Wheat	extracellular	57.12	55.49
CDY22399	Canola	extracellular	51.27	53.46
Bra033592.1-P	Field mustard	extracellular	51.27	53.46
TraesCS7B01G219100.1	Wheat	extracellular	51.46	53.44
TraesCS5B01G169500.1	Wheat	unclear	51.66	53.11
CDX72723	Canola	extracellular	50.88	53.05
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.27	52.92
AT4G39000.1	Thale cress	extracellular, vacuole	50.68	52.74
CDY22400	Canola	extracellular, vacuole	47.56	52.47
CDY41954	Canola	vacuole	47.56	52.25
Bra033591.1-P	Field mustard	extracellular, vacuole	49.9	52.24
Bra011882.1-P	Field mustard	extracellular	49.9	52.03
CDY42597	Canola	extracellular	46.98	51.61
TraesCS2B01G327200.1	Wheat	nucleus	50.49	50.98
TraesCS6B01G122000.1	Wheat	vacuole	39.18	49.02
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	43.66	45.71
TraesCS1B01G107700.1	Wheat	extracellular	44.05	44.66
TraesCS6B01G368000.1	Wheat	extracellular	42.11	43.29
TraesCS7B01G046900.1	Wheat	vacuole	43.47	43.05
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	42.69	42.52
TraesCS6B01G342600.1	Wheat	vacuole	43.86	42.21
TraesCS7B01G104600.1	Wheat	vacuole	42.5	40.9
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.72	40.45
TraesCS5B01G201100.1	Wheat	vacuole	42.3	40.26
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	46.2	38.23
TraesCS2B01G586600.1	Wheat	extracellular	44.25	36.97

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5B01G318000	EnsemblPlants:TraesCS5B01G318000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:+:502150537..502153103

Molecular Weight (calculated)

56615.1 Da

IEP (calculated)

5.328

GRAVY (calculated)

-0.475

Length

513 amino acids

Sequence
(BLAST)

001: MASAPVHHLR VRVLLLVALC FASASASASF PWPWKRSGHD YRDALAKCIL FFEGQRSGRL PADQRAAWRG DSGVSDGKAA GPGVDLEGGY YDAGDNVKFG
101: FPMAFTTTML SWSVLEFGDD MPREERRHAA DAVRWGTDYL LKTLAHPGVI FMQVGDPWKD HECWERPEDM DTERTVYNVS SGRPGSEVAG ETAAALAAAS
201: MVFRDGDREY AELLLDSAKK AFEFADSHRG AYSDDMDLRA GGCPFYCDFN GYQDELLWGA AWLRRASGDD TFREYIQNNG KTLGAEDSIN EFGWDNKHAG
301: LNVLISKEFI EGETLSMQSY KESADSFICT LIPESSSPHI QYTPGGMIYK PGGSNMQHVT SISFLLLTYA KYLTKSSHTV NCGDISVGPD TLRLQAKKQT
401: DYLLGDNPMK MSYMVGYGDR YPQRIHHRGS SLPSIKDHPE RMACKDGTPY YDSSSPNPNP LVGAIVGGPG EDDAYGDDRA DYRKSEPTTY INAPLVGVLA
501: YFVGNPNPGH IRH

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.