Factsheet for TraesCS7B01G047000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G093600.1	Wheat	cytosol, vacuole	79.22	97.61
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	79.03	97.37
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	96.89	96.89
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	96.7	96.7
TraesCS7B01G046900.1	Wheat	vacuole	95.73	95.17
TraesCS7A01G144700.1	Wheat	vacuole	94.37	93.82
HORVU7Hr1G029660.1	Barley	extracellular, mitochondrion, vacuole	92.43	89.47
HORVU7Hr1G029680.1	Barley	peroxisome, vacuole	92.62	87.36
HORVU0Hr1G023830.2	Barley	vacuole	92.43	85.61
EES15002	Sorghum	endoplasmic reticulum, extracellular	80.78	82.21
Os08t0425300-00	Rice	extracellular	74.56	72.59
TraesCS7B01G104600.1	Wheat	vacuole	69.13	66.79
TraesCS6B01G342600.1	Wheat	vacuole	68.54	66.23
Solyc07g049300.2.1	Tomato	extracellular, vacuole	62.91	64.41
TraesCS5B01G201100.1	Wheat	vacuole	66.99	64.01
PGSC0003DMT400001781	Potato	extracellular, vacuole	62.33	63.82
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	62.14	61.42
Bra005536.1-P	Field mustard	vacuole	61.94	61.11
CDY17123	Canola	vacuole	61.94	61.11
KRH14764	Soybean	cytosol, nucleus, vacuole	47.96	60.84
AT2G32990.1	Thale cress	extracellular, vacuole	61.94	60.76
CDY19428	Canola	vacuole	61.55	60.73
CDY19174	Canola	vacuole	61.94	60.53
KRH73374	Soybean	vacuole	61.16	60.11
GSMUA_Achr7P02160_001	Banana	vacuole	59.42	60.0
CDY23776	Canola	vacuole	61.16	59.89
Bra021821.1-P	Field mustard	vacuole	59.03	59.73
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	58.64	59.22
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	60.39	58.79
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	45.24	47.55
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.24	46.88
TraesCS7B01G219100.1	Wheat	extracellular	44.85	46.76
TraesCS5B01G169500.1	Wheat	unclear	45.05	46.49
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	54.37	45.16
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	43.5	45.07
TraesCS6B01G325400.1	Wheat	extracellular	42.52	44.15
TraesCS1B01G107700.1	Wheat	extracellular	42.14	42.89
TraesCS5B01G318000.1	Wheat	vacuole	42.52	42.69
TraesCS2B01G586600.1	Wheat	extracellular	49.71	41.69
TraesCS6B01G368000.1	Wheat	extracellular	40.39	41.68
TraesCS6B01G122000.1	Wheat	vacuole	32.62	40.98
TraesCS7B01G111700.1	Wheat	extracellular	41.94	40.91
TraesCS2B01G327200.1	Wheat	nucleus	39.81	40.35

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF35	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G047000	EnsemblPlants:TraesCS7B01G047000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:45848044..45849878

Molecular Weight (calculated)

57239.7 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.314

Length

515 amino acids

Sequence
(BLAST)

001: MATRTKMLLS LAICVVLALV HLPITTAGGG EGAAPFNYKK ALHSSLLYFE AQRSGRLPHN QRVKWRGHSG LADGLQQGVD LVGGYYDAGD NVKFGLLMAF
101: TVTMLSWSAM EFADDITATG EWRHVLEAIK WGTDYFIKAH TEPYVLWAEV GDGDTDHYCW QRPEDMTTSR QAYKVDRDNP GSDLVGETAA ALAAASMVFR
201: RSNPHYAQVL LHHAEQLFEF GDKYRGKYDS SIGEAYSYYA SVSGYGDEML WAALWLHRAT GKASYLDYAV DMADEFGGTS WAITEFSWDV KYAGLQILAT
301: KVLLEGKHPE HKATLEKYKA KAEHYLCACL NKNGDAGNVN RTAGGMLFVR QWNNMQYVTN AAFLLTVYSR YLTSAGQEPP VLQCPDGPAH ADELRSLARA
401: QTDYVLGANP AGVSYLVGYG PRFPRRMHHR GASTVSHRGD GRFIGCMQGY DNWFLRRGAN PNVVVGAIVG GPDHLDRFRD RRDNYMQTEA CTYNTAPMVD
501: IFAHLHGEMA ITKKS

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.