Factsheet for TraesCS5B01G201100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G208900.1	Wheat	vacuole	95.55	96.08
TraesCS5A01G202600.1	Wheat	vacuole	94.43	94.96
HORVU5Hr1G060140.1	Barley	vacuole	83.49	77.85
EER98860	Sorghum	golgi, mitochondrion, vacuole	78.11	77.68
Os09t0394300-01	Rice	extracellular, vacuole	62.89	76.87
Zm00001d020371_P001	Maize	mitochondrion	76.62	76.62
TraesCS7B01G046900.1	Wheat	vacuole	65.86	68.53
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	64.01	66.99
PGSC0003DMT400001781	Potato	extracellular, vacuole	61.04	65.41
Solyc07g049300.2.1	Tomato	extracellular, vacuole	60.67	65.01
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	62.15	64.3
TraesCS7B01G104600.1	Wheat	vacuole	62.34	63.04
CDY17123	Canola	vacuole	61.04	63.03
AT2G32990.1	Thale cress	extracellular, vacuole	61.22	62.86
Bra005536.1-P	Field mustard	vacuole	60.85	62.84
CDY19428	Canola	vacuole	60.85	62.84
TraesCS6B01G342600.1	Wheat	vacuole	61.6	62.29
CDY19174	Canola	vacuole	60.85	62.24
GSMUA_Achr7P02160_001	Banana	vacuole	58.63	61.96
Bra021821.1-P	Field mustard	vacuole	58.07	61.49
CDY23776	Canola	vacuole	59.93	61.41
KRH73374	Soybean	vacuole	58.81	60.5
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	59.0	60.11
KRH14764	Soybean	cytosol, nucleus, vacuole	45.08	59.85
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	56.4	59.61
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	44.53	48.98
TraesCS7B01G219100.1	Wheat	extracellular	42.3	46.15
TraesCS6B01G325400.1	Wheat	extracellular	42.12	45.77
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.12	45.67
TraesCS5B01G169500.1	Wheat	unclear	42.12	45.49
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	52.13	45.32
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	41.0	44.47
TraesCS2B01G586600.1	Wheat	extracellular	50.46	44.3
TraesCS5B01G318000.1	Wheat	vacuole	40.26	42.3
TraesCS6B01G122000.1	Wheat	vacuole	32.1	42.2
TraesCS2B01G327200.1	Wheat	nucleus	39.33	41.73
TraesCS1B01G107700.1	Wheat	extracellular	38.96	41.5
TraesCS7B01G111700.1	Wheat	extracellular	40.45	41.29
TraesCS6B01G368000.1	Wheat	extracellular	36.92	39.88

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PFscan:PS51257
PANTHER:PTHR22298	PANTHER:PTHR22298:SF43	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G201100
EnsemblPlants:TraesCS5B01G201100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:363662726..363669909

Molecular Weight (calculated)

59622.5 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.237

Length

539 amino acids

Sequence
(BLAST)

001: MSRGRVRRAA GSPVVATAAA LVLLQAAVLA LSLGCDAAAV TADAEPDYRE ALSKSLLYFE AQRSGRLPYN QRVRWRGHSG ITDGLQQGVD LVGGYYDAGD
101: HVKFGLPMAF TVTMLSWGAI EFGDEIAAAG EWHHTLEAIK WGTDYFIKAH TEPFVYWAEV GDGDTDHYCW QRPEDMTTSR KAYRVDKDNP GSDLVAETAA
201: ALAAASIVFR ASNPHYSHIL LHHAQQLFEF GDRYRGNYDM SITEVRGFYA SVSGYRDELL WAAFWLHRAT GKEEFLRYAV DKADCFGGVG WAMTEFSWDV
301: KYAGLQVLAS KLLLDGDPLG KQDRLVLEQY RAKAEHYLCA CLRLNNGSNV DRSPGGMLYV RQWNNLQYAS SAAFLLTVYS RYLAGAGARL RCPDAPAVPP
401: SELLALARSQ AEYILGRNPL RLSYMVGYGP RFPAHVHHRA ASIVSHKANN RFIGCMQGFD NWYTHKRPNP NVLTGAIVGG PNCRDEFRDD RTNYVQTEAC
501: TYNTAPMVAV FARLHNLSTA AAEEGCRPGA ALGLSAKCR

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.