Factsheet for HORVU5Hr1G060140.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	vacuole
MultiLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G202600.1	Wheat	vacuole	78.37	84.51
TraesCS5D01G208900.1	Wheat	vacuole	77.85	83.96
TraesCS5B01G201100.1	Wheat	vacuole	77.85	83.49
Os09t0394300-01	Rice	extracellular, vacuole	59.34	77.78
EER98860	Sorghum	golgi, mitochondrion, vacuole	67.99	72.51
Zm00001d020371_P001	Maize	mitochondrion	66.61	71.43
HORVU7Hr1G040680.3	Barley	vacuole	60.38	62.43
HORVU7Hr1G029660.1	Barley	extracellular, mitochondrion, vacuole	57.09	62.03
HORVU7Hr1G029680.1	Barley	peroxisome, vacuole	57.27	60.62
PGSC0003DMT400001781	Potato	extracellular, vacuole	52.6	60.44
Solyc07g049300.2.1	Tomato	extracellular, vacuole	52.25	60.04
KRH14764	Soybean	cytosol, nucleus, vacuole	42.04	59.85
HORVU0Hr1G023830.2	Barley	vacuole	57.09	59.35
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	52.94	58.73
AT2G32990.1	Thale cress	extracellular, vacuole	52.77	58.1
CDY19428	Canola	vacuole	52.42	58.05
CDY17123	Canola	vacuole	52.42	58.05
Bra005536.1-P	Field mustard	vacuole	52.25	57.85
GSMUA_Achr7P02160_001	Banana	vacuole	50.87	57.65
CDY19174	Canola	vacuole	52.42	57.5
CDY23776	Canola	vacuole	51.73	56.84
Bra021821.1-P	Field mustard	vacuole	50.0	56.78
KRH73374	Soybean	vacuole	51.38	56.68
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	48.96	55.49
HORVU6Hr1G022270.2	Barley	mitochondrion	49.65	52.47
HORVU1Hr1G015550.1	Barley	vacuole	39.45	46.53
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	36.33	42.42
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	45.67	42.38
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	36.33	42.25
HORVU6Hr1G073570.3	Barley	extracellular	35.81	41.65
HORVU1Hr1G085830.2	Barley	vacuole	44.64	41.35
HORVU2Hr1G120100.1	Barley	extracellular	43.77	41.07
HORVU7Hr1G041610.1	Barley	vacuole	34.26	39.44
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	35.47	39.12
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	33.56	38.88
HORVU6Hr1G022300.1	Barley	extracellular, mitochondrion, plastid, vacuole	8.82	38.06
HORVU5Hr1G081200.5	Barley	vacuole	33.91	38.06
HORVU1Hr1G019520.1	Barley	golgi, mitochondrion, vacuole	34.6	37.52
HORVU6Hr1G081500.1	Barley	plastid	32.87	36.47

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	EnsemblPlantsGene:HORVU5Hr1G060140	EnsemblPlants:HORVU5Hr1G060140.1	InterPro:IPR012341	PFAM:PF00759
ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF43	SUPFAM:SSF48208	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:470768621..470817144

Molecular Weight (calculated)

52828.2 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.290

Length

578 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXPYNQRV RWRGHSGITD GLQQGVDLVG GYYDAGDHVK FGLPMAFTVT MLSWGAIEFG DDIAAAGEWQ HTLEAIKWGT DYFIKAHTEP FVYWAEVGDG
201: DTDHYCWQRP EDMTTSRKAY RVDKENPGSD LVAETAAALA AASIVFRASN PHYSDILLHH AKQLFEFGDR YRGNYDSSIA EVRSFYASVS GYRDELLWAA
301: FWLHRATGKE EFLRYAVDKA DCFGGVGWAM TEFSWDVKYA GLQVLASKLL LDGDPQGKRH RVVLEQYKAK AEHYLCACLR LNNGSNVDRS PGGMLYVRQW
401: NNLQYASSAA FLLTVYSRYL AGAGAGARLR CPDAPAVPPS ELLALARSQA EYILGRNPLR LSYMVGYGPR YPAHVHHRAA SIVSHKANNR FIGCMQGFDD
501: WFARKRPNPN VLTGAIVGGP NCRDEFRDDR GNYVQTEACT YNTAPMVAVF ARLHNLSTAA AEERCRPGTA PGLSAKCR

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.