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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • vacuole 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plastid, vacuole
Any Predictor:extracellular, mitochondrion, plastid, vacuole
ChloroP:plastid
iPSORT:plastid
MultiLoc:vacuole
TargetP:mitochondrion
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G022270.2 Barley mitochondrion 100.0 24.5
HORVU7Hr1G029660.1 Barley extracellular, mitochondrion, vacuole 52.99 13.35
HORVU7Hr1G029680.1 Barley peroxisome, vacuole 52.99 13.0
HORVU0Hr1G023830.2 Barley vacuole 52.99 12.77
HORVU1Hr1G015550.1 Barley vacuole 44.03 12.04
HORVU6Hr1G073570.3 Barley extracellular 44.03 11.87
HORVU7Hr1G041610.1 Barley vacuole 44.03 11.75
HORVU5Hr1G081200.5 Barley vacuole 44.78 11.65
HORVU7Hr1G040680.3 Barley vacuole 48.51 11.63
HORVU5Hr1G052830.1 Barley endoplasmic reticulum, extracellular 42.54 11.47
HORVU7Hr1G075970.1 Barley endoplasmic reticulum, extracellular, vacuole 41.04 11.11
HORVU2Hr1G077130.1 Barley extracellular, vacuole 41.04 11.02
HORVU1Hr1G019520.1 Barley golgi, mitochondrion, vacuole 42.54 10.69
HORVU1Hr1G085830.2 Barley vacuole 49.25 10.58
HORVU1Hr1G079980.3 Barley extracellular, vacuole 41.04 10.5
HORVU6Hr1G081500.1 Barley plastid 37.31 9.6
HORVU2Hr1G120100.1 Barley extracellular 42.54 9.25
HORVU3Hr1G029470.2 Barley endoplasmic reticulum, extracellular, vacuole 42.54 9.15
HORVU5Hr1G060140.1 Barley vacuole 38.06 8.82
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfUniProt:A0A287TKQ7
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:Glyco_hydro_9EnsemblPlantsGene:HORVU6Hr1G022300
EnsemblPlants:HORVU6Hr1G022300.1InterPro:IPR012341PFAM:PF00759PANTHER:PTHR22298PANTHER:PTHR22298:SF53SUPFAM:SSF48208
TMHMM:TMhelixUniParc:UPI000B4756ACSEG:seg:::
Description
No Description!
Coordinates
chrchr6H:+:70266077..70266480
Molecular Weight (calculated)
14409.0 Da
IEP (calculated)
7.757
GRAVY (calculated)
0.010
Length
134 amino acids
Sequence
(BLAST)
001: SIAPSTLGYS QFLSWPARAR AGRAVGEMSD VTGRFALAAA VVAVSLVMAS ASAARHDYGD ALSKSLLYFE SQRSGRLPYN QRVRWRGHSG LTDGLEQGVD
101: LVGGYYDAGD HVKFGLPMAF TVTMLSWAVL EYGD
Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)
001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR
Arabidopsis Description
AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.