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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G365100.1 Wheat extracellular, vacuole 92.94 97.79
TraesCS1B01G377100.1 Wheat extracellular, vacuole 92.75 97.79
TraesCS1A01G360700.3 Wheat extracellular, vacuole 94.47 93.93
Os01t0312800-01 Rice extracellular 83.21 87.37
EES00659 Sorghum vacuole 78.05 81.64
Zm00001d009097_P001 Maize extracellular 79.2 79.81
GSMUA_Achr11P... Banana extracellular, vacuole 70.23 72.73
KRH69273 Soybean extracellular, vacuole 68.89 71.2
KRH31855 Soybean nucleus 68.13 70.69
KRH68213 Soybean nucleus 66.98 70.2
VIT_07s0005g00740.t01 Wine grape plastid 67.75 69.47
PGSC0003DMT400081314 Potato extracellular 65.65 68.8
KRG96467 Soybean extracellular, vacuole 53.82 67.79
AT1G02800.1 Thale cress extracellular, vacuole 64.69 67.66
Solyc09g075360.2.1 Tomato plastid 65.84 67.65
AT4G02290.1 Thale cress plastid 66.41 67.44
CDY22043 Canola extracellular, vacuole 66.41 67.18
Bra018559.1-P Field mustard extracellular, vacuole 65.84 67.12
Bra036281.1-P Field mustard extracellular, vacuole 66.22 66.99
CDX97262 Canola vacuole 65.65 66.93
CDY52780 Canola extracellular, vacuole 66.03 66.8
CDY32480 Canola extracellular, vacuole 64.89 66.41
Bra032584.1-P Field mustard extracellular, vacuole 65.08 65.96
CDY37459 Canola endoplasmic reticulum, extracellular 64.12 65.88
CDY01915 Canola cytosol 43.89 63.36
HORVU7Hr1G075970.1 Barley endoplasmic reticulum, extracellular, vacuole 57.25 60.61
HORVU5Hr1G052830.1 Barley endoplasmic reticulum, extracellular 56.49 59.56
HORVU7Hr1G041610.1 Barley vacuole 56.49 58.96
HORVU6Hr1G073570.3 Barley extracellular 54.77 57.75
HORVU2Hr1G077130.1 Barley extracellular, vacuole 52.86 55.51
HORVU5Hr1G081200.5 Barley vacuole 53.82 54.76
HORVU1Hr1G015550.1 Barley vacuole 46.18 49.39
HORVU1Hr1G019520.1 Barley golgi, mitochondrion, vacuole 47.9 47.09
HORVU6Hr1G081500.1 Barley plastid 42.56 42.8
HORVU7Hr1G029660.1 Barley extracellular, mitochondrion, vacuole 42.56 41.92
HORVU6Hr1G022300.1 Barley extracellular, mitochondrion, plastid, vacuole 10.5 41.04
HORVU7Hr1G029680.1 Barley peroxisome, vacuole 42.75 41.03
HORVU7Hr1G040680.3 Barley vacuole 43.7 40.97
HORVU6Hr1G022270.2 Barley mitochondrion 42.56 40.77
HORVU0Hr1G023830.2 Barley vacuole 42.75 40.29
HORVU1Hr1G085830.2 Barley vacuole 46.37 38.94
HORVU2Hr1G120100.1 Barley extracellular 45.61 38.8
HORVU3Hr1G029470.2 Barley endoplasmic reticulum, extracellular, vacuole 45.23 38.04
HORVU5Hr1G060140.1 Barley vacuole 39.12 35.47
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfUniProt:A0A287GF75
GO:GO:0000272GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0008810GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798
GO:GO:0030245InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_ASEnsemblPlantsGene:HORVU1Hr1G079980EnsemblPlants:HORVU1Hr1G079980.3
InterPro:IPR012341PFAM:PF00759ScanProsite:PS00592ScanProsite:PS00698PANTHER:PTHR22298PANTHER:PTHR22298:SF55
SUPFAM:SSF48208SignalP:SignalP-noTMUniParc:UPI000B481434SEG:seg::
Description
Endoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A287GF75]
Coordinates
chrchr1H:-:524197275..524199819
Molecular Weight (calculated)
56824.6 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.159
Length
524 amino acids
Sequence
(BLAST)
001: MAAVLRCLLL ALAVLVVRNA AALPHHGPAK HDYRDALTKS ILFFEGQRSG RLPPSQRVSW RRSSGLSDGS SVKASTSGRS FLLHFPCIAL CSMADIASFP
101: QVDLTGGYYD AGDNVKFGFP LAFSSTMLAW SVLEFGGMMK GELQHARDAV RWGSDYLLKA TAHPDTVYVQ VGDAGKDHAC WERPEDMDTP RTVYKVDPST
201: PGSDVAAETA AALAAASLVF RKSDPAYSSR LVARAKRVFE FADKHRGVYS AKLSSYVCPY YCSYSGYQDE LLWGAAWLHR ATKSPVYLSY IKLNGQLLGA
301: DEQDNTFGWD NKHAGARILL SKSFLVQKVG ALQEYKAHAD SFICSMVPGT PTDQTTYTRG GLLFKLSDSN MQYVTSSSFL LLTYAKYLVS AKKTVSCGGV
401: AVTPQRLRAI ARRQVDYLLG SNPMGMSYMV GYGAKYPKKL HHRASSLPSV AAHPGKIGCS QGFTGLYSGA ANPNVHVGAV VGGPNQNDQF PDQRSDYEHS
501: EPATYINAPL VGALAYLAHS SGQL
Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)
001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL
Arabidopsis Description
AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.