Factsheet for Bra018559.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97262	Canola	vacuole	99.81	99.81
AT4G02290.1	Thale cress	plastid	91.25	90.89
Bra036281.1-P	Field mustard	extracellular, vacuole	90.86	90.15
CDY01915	Canola	cytosol	60.51	85.67
KRH31855	Soybean	nucleus	77.43	78.81
KRH68213	Soybean	nucleus	76.65	78.8
KRG96467	Soybean	extracellular, vacuole	63.23	78.12
KRH69273	Soybean	extracellular, vacuole	77.04	78.11
VIT_07s0005g00740.t01	Wine grape	plastid	77.43	77.89
PGSC0003DMT400081314	Potato	extracellular	74.12	76.2
Solyc09g075360.2.1	Tomato	plastid	74.51	75.1
Bra032584.1-P	Field mustard	extracellular, vacuole	75.1	74.66
GSMUA_Achr11P...	Banana	extracellular, vacuole	72.18	73.32
Os01t0312800-01	Rice	extracellular	67.51	69.54
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	67.12	69.42
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	67.12	69.28
EES00659	Sorghum	vacuole	66.93	68.66
Zm00001d009097_P001	Maize	extracellular	67.7	66.92
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	67.12	65.84
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	67.12	65.46
Bra016192.1-P	Field mustard	extracellular, vacuole	59.14	60.92
Bra003946.1-P	Field mustard	extracellular	57.39	60.45
Bra024571.1-P	Field mustard	extracellular	57.98	60.32
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	53.7	57.14
Bra011881.1-P	Field mustard	cytosol	52.72	57.05
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	53.31	56.61
Bra007982.1-P	Field mustard	extracellular	52.92	56.2
Bra007983.1-P	Field mustard	extracellular	51.36	54.66
Bra013709.1-P	Field mustard	extracellular	48.05	51.46
Bra011882.1-P	Field mustard	extracellular	49.03	51.22
Bra019296.1-P	Field mustard	extracellular, vacuole	47.47	50.83
Bra033592.1-P	Field mustard	extracellular	48.44	50.61
Bra033591.1-P	Field mustard	extracellular, vacuole	47.86	50.2
Bra019455.1-P	Field mustard	golgi, vacuole	45.72	48.35
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.44	48.19
Bra004846.1-P	Field mustard	nucleus	43.19	47.23
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	42.22	45.59
Bra004845.1-P	Field mustard	extracellular	43.19	45.4
Bra004844.1-P	Field mustard	extracellular, vacuole	42.8	44.99
Bra005536.1-P	Field mustard	vacuole	45.33	44.64
Bra021821.1-P	Field mustard	vacuole	43.19	43.61
Bra027735.1-P	Field mustard	extracellular, vacuole	48.05	39.84
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.86	39.61
Bra032270.1-P	Field mustard	extracellular	43.19	36.45
Bra018765.1-P	Field mustard	vacuole	43.19	35.58

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra018559
EnsemblPlants:Bra018559.1	EnsemblPlants:Bra018559.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M4DPW8	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	TMHMM:TMhelix	UniParc:UPI0002547416	SEG:seg	:

Description

AT4G02290 (E=5e-277) AtGH9B13 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA05:+:9247338..9249914

Molecular Weight (calculated)

57453.6 Da

IEP (calculated)

9.476

GRAVY (calculated)

-0.196

Length

514 amino acids

Sequence
(BLAST)

001: MAFLGFSSAS YTFRVIIFLS LFFFLCNGFS YPDSSLFYTH HHRHNLAKHN YKDALTKSIL FFEGQRSGKL PPNQRMTWRR DSGLSDGSAL HVDLVGGYYD
101: AGDNIKFGFP MAFTTTMLSW SVIEFGGLMK SELGNAKVAI RWATDYLLKA TSRPDTIYVQ VGDANKDHSC WERPEDMDTQ RSVFKVDKNT PGSDVAAETA
201: AALAAAAIVF RKSDPSYSKI LLRRAIRVFA FADRYRGTYS AGLKPDVCPF YCSFSGYQDE LLWGAAWLQK ATRSLKYLNY IKVNGQILGA AEYDNTFGWD
301: NKHAGARILL SKTFLVQKMK TLSEYKGHAD NFICSVIPGA PFYISQYTPG GLLFKMADEN MQYVTSTSFL LLTYAKYLTS ARTVVHCGGS VYTPGRLRSI
401: AKKQVDYLLG DNPLRMSYMV GYGPKFPRRI HHRGSSLPCV ASHPAKIQCH QGFSIMHSQS PNPNFLVGAV VGGPDKHDRF PDVRSDYEQS EPATYINAPL
501: VGALAYFAHS FGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.