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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • vacuole 5
  • plasma membrane 4
  • extracellular 5
  • endoplasmic reticulum 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:vacuole
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17123 Canola vacuole 99.62 99.62
Bra021821.1-P Field mustard vacuole 91.57 93.91
AT2G32990.1 Thale cress extracellular, vacuole 92.91 92.38
KRH14764 Soybean cytosol, nucleus, vacuole 57.85 74.38
PGSC0003DMT400001781 Potato extracellular, vacuole 70.88 73.56
Solyc07g049300.2.1 Tomato extracellular, vacuole 70.5 73.16
VIT_12s0059g01250.t01 Wine grape extracellular, vacuole 72.22 72.36
KRH73374 Soybean vacuole 72.61 72.33
GSMUA_Achr2P05330_001 Banana vacuole 60.73 66.04
GSMUA_Achr3P28200_001 Banana endoplasmic reticulum, golgi, vacuole 57.66 65.58
EES15002 Sorghum endoplasmic reticulum, extracellular 61.88 63.83
GSMUA_Achr7P02160_001 Banana vacuole 61.49 62.94
TraesCSU01G093600.1 Wheat cytosol, vacuole 50.19 62.68
GSMUA_Achr8P25280_001 Banana endoplasmic reticulum, extracellular, vacuole 57.47 62.5
TraesCS7A01G144400.1 Wheat cytosol, vacuole 50.0 62.44
Os02t0151300-01 Rice endoplasmic reticulum, extracellular, vacuole 63.79 62.36
EER98860 Sorghum golgi, mitochondrion, vacuole 64.56 62.18
TraesCS7B01G046900.1 Wheat vacuole 61.69 62.16
TraesCS6B01G342600.1 Wheat vacuole 63.41 62.1
TraesCS7B01G047000.1 Wheat extracellular, vacuole 61.11 61.94
TraesCS7D01G146000.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.11 61.94
Zm00001d051814_P002 Maize vacuole 63.03 61.84
TraesCS6A01G312400.1 Wheat vacuole 63.79 61.78
TraesCS7A01G144500.1 Wheat endoplasmic reticulum, extracellular, vacuole 60.92 61.75
TraesCS5A01G202600.1 Wheat vacuole 63.22 61.57
OQU76161 Sorghum vacuole 51.72 61.22
TraesCS7A01G144700.1 Wheat vacuole 60.73 61.2
Zm00001d017978_P001 Maize plasma membrane 63.6 61.14
Os02t0738600-01 Rice mitochondrion 64.75 61.12
Zm00001d020371_P001 Maize mitochondrion 63.03 61.04
TraesCS5D01G208900.1 Wheat vacuole 62.64 61.01
TraesCS5B01G201100.1 Wheat vacuole 62.84 60.85
Os09t0394300-01 Rice extracellular, vacuole 51.34 60.77
TraesCS7D01G201000.1 Wheat extracellular, vacuole 61.88 60.71
TraesCS6D01G291800.1 Wheat vacuole 63.22 60.66
TraesCS6D01G112100.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.3 60.49
TraesCS6A01G122100.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.3 60.49
TraesCS7B01G104600.1 Wheat vacuole 61.69 60.41
TraesCS6B01G150300.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.11 60.3
GSMUA_Achr8P22580_001 Banana endoplasmic reticulum, golgi, mitochondrion, vacuole 58.81 60.2
Zm00001d044744_P001 Maize extracellular, vacuole 62.45 60.15
Zm00001d015292_P001 Maize endoplasmic reticulum, extracellular, vacuole 60.54 60.08
HORVU7Hr1G029660.1 Barley extracellular, mitochondrion, vacuole 61.11 59.96
Os08t0425300-00 Rice extracellular 60.15 59.36
HORVU6Hr1G022270.2 Barley mitochondrion 61.49 58.68
HORVU7Hr1G029680.1 Barley peroxisome, vacuole 61.3 58.61
EES06282 Sorghum extracellular, vacuole 59.77 58.32
HORVU7Hr1G040680.3 Barley vacuole 61.49 57.42
HORVU0Hr1G023830.2 Barley vacuole 61.11 57.37
Os06t0247900-01 Rice cytosol 50.19 57.33
TraesCS7A01G197900.1 Wheat extracellular, vacuole 61.49 55.06
HORVU5Hr1G060140.1 Barley vacuole 57.85 52.25
Bra004846.1-P Field mustard nucleus 44.64 49.57
Bra027699.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 58.81 49.44
Bra027735.1-P Field mustard extracellular, vacuole 58.43 49.19
Bra000354.1-P Field mustard extracellular, plastid, vacuole 44.06 48.32
Bra004845.1-P Field mustard extracellular 45.02 48.06
Bra004844.1-P Field mustard extracellular, vacuole 44.44 47.44
Bra013709.1-P Field mustard extracellular 43.1 46.88
Bra032584.1-P Field mustard extracellular, vacuole 45.98 46.42
Bra034983.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 39.08 46.15
Bra024571.1-P Field mustard extracellular 43.68 46.15
Bra003946.1-P Field mustard extracellular 42.91 45.9
Bra016192.1-P Field mustard extracellular, vacuole 43.49 45.49
Bra018559.1-P Field mustard extracellular, vacuole 44.64 45.33
Bra011881.1-P Field mustard cytosol 41.19 45.26
Bra019296.1-P Field mustard extracellular, vacuole 41.57 45.21
Bra016143.1-P Field mustard extracellular, plastid, vacuole 41.76 45.04
Bra032270.1-P Field mustard extracellular 52.49 44.99
Bra012349.1-P Field mustard extracellular, plastid, vacuole 41.57 44.93
Bra033592.1-P Field mustard extracellular 42.34 44.92
Bra019455.1-P Field mustard golgi, vacuole 41.57 44.65
Bra036281.1-P Field mustard extracellular, vacuole 44.25 44.59
Bra018765.1-P Field mustard vacuole 53.07 44.39
Bra011882.1-P Field mustard extracellular 41.76 44.31
Bra007983.1-P Field mustard extracellular 41.0 44.31
Bra007982.1-P Field mustard extracellular 40.61 43.8
EES07289 Sorghum mitochondrion 63.03 43.4
Bra033591.1-P Field mustard extracellular, vacuole 39.85 42.45
GSMUA_Achr4P12980_001 Banana extracellular, vacuole 57.28 36.69
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfEnsemblPlantsGene:Bra005536
EnsemblPlants:Bra005536.1EnsemblPlants:Bra005536.1-PGO:GO:0000272GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810GO:GO:0009056GO:GO:0009987
GO:GO:0016787GO:GO:0016798GO:GO:0030245InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341
UniProt:M4CMU8PFAM:PF00759ScanProsite:PS00592PANTHER:PTHR22298PANTHER:PTHR22298:SF23SUPFAM:SSF48208
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00025474EFSEG:seg::
Description
AT2G32990 (E=9e-273) AtGH9B8 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds
Coordinates
chrA05:-:6063918..6066983
Molecular Weight (calculated)
59140.4 Da
IEP (calculated)
6.120
GRAVY (calculated)
-0.411
Length
522 amino acids
Sequence
(BLAST)
001: MEIHRHRRWH FLLLITISSA ISLIGVSSET EVGGFDYGEA LSKSLLYFEA QRSGRLPYNQ RVTWRDHSGL TDGLEQGVDL VGGYHDAGDH VKFGLPMAFT
101: VTMLSWSVIE YGDSLASTGE LSHALEAIKW GTDYFIKAHT SPNVLWAEVG DGDTDHYCWQ RPEDMTTSRR AFKIDENNPG SDLAGETAAA MAAASIVFRT
201: TNPHYSHLLL HHAQQLFEFG DKYRGKYDES LRVVKSYYAS VSGYMDELLW GATWLYRATD NDHYMSYVVD MAHQLGGLSW AMSEFSWDVK FAGVQLLASM
301: LIKEDKHKQH SEVLQQYKSK ADHYLCSILN KNINGTNVQR TPGGLLYVRQ WNNMQYVSTA SFLLTVYSDH LRKSNSDLEC HEGTVTPDEM LVFAKSQIDY
401: TLGSNPMKTS YLVGYGPKYP TRVHHRGASI ASYKDYKGFI GCTQGYDYWY GRSEPNPSVL VGALVGGPDD RDNFFDRRDN YVQTEACTYN TAPLVGVFAR
501: LIEIEEQKLE EEDVRLVATY RK
Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)
001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR
Arabidopsis Description
AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.