Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015292_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 93.46 | 95.06 |
| Os02t0151300-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 80.93 | 81.09 |
| TraesCS6B01G150300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 76.45 | 77.32 |
| TraesCS6D01G112100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 76.26 | 77.13 |
| TraesCS6A01G122100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 76.07 | 76.94 |
| HORVU6Hr1G022270.2 | Barley | mitochondrion | 74.39 | 72.76 |
| GSMUA_Achr3P28200_001 | Banana | endoplasmic reticulum, golgi, vacuole | 55.14 | 64.27 |
| GSMUA_Achr2P05330_001 | Banana | vacuole | 57.01 | 63.54 |
| PGSC0003DMT400001781 | Potato | extracellular, vacuole | 59.07 | 62.82 |
| Solyc07g049300.2.1 | Tomato | extracellular, vacuole | 58.69 | 62.43 |
| VIT_12s0059g01250.t01 | Wine grape | extracellular, vacuole | 60.75 | 62.38 |
| GSMUA_Achr8P25280_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 55.33 | 61.67 |
| OQU76161 | Sorghum | vacuole | 50.28 | 61.0 |
| KRH73374 | Soybean | vacuole | 59.63 | 60.88 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 59.44 | 60.57 |
| EER98860 | Sorghum | golgi, mitochondrion, vacuole | 61.31 | 60.52 |
| KRH14764 | Soybean | cytosol, nucleus, vacuole | 45.79 | 60.34 |
| CDY19428 | Canola | vacuole | 58.69 | 60.15 |
| CDY17123 | Canola | vacuole | 58.5 | 59.96 |
| CDY23776 | Canola | vacuole | 58.88 | 59.89 |
| Bra005536.1-P | Field mustard | vacuole | 58.32 | 59.77 |
| EES15002 | Sorghum | endoplasmic reticulum, extracellular | 56.26 | 59.49 |
| CDY19174 | Canola | vacuole | 58.5 | 59.39 |
| Bra021821.1-P | Field mustard | vacuole | 55.14 | 57.96 |
| KXG21209 | Sorghum | cytosol | 34.95 | 48.07 |
| EES00659 | Sorghum | vacuole | 43.18 | 46.11 |
| EES07307 | Sorghum | vacuole | 43.18 | 45.83 |
| EES04405 | Sorghum | plasma membrane, vacuole | 43.36 | 45.14 |
| EES13778 | Sorghum | extracellular | 42.99 | 44.49 |
| EES07289 | Sorghum | mitochondrion | 62.99 | 44.46 |
| EES13257 | Sorghum | extracellular | 41.31 | 44.02 |
| EES19222 | Sorghum | vacuole | 51.03 | 43.54 |
| EES00050 | Sorghum | extracellular, mitochondrion, plastid, vacuole | 53.08 | 43.43 |
| EES13091 | Sorghum | vacuole | 50.28 | 42.7 |
| EER89549 | Sorghum | mitochondrion | 44.49 | 42.35 |
| EES05890 | Sorghum | vacuole | 39.25 | 42.25 |
| EES12225 | Sorghum | plastid | 40.0 | 41.55 |
| GSMUA_Achr4P12980_001 | Banana | extracellular, vacuole | 57.57 | 37.79 |
| OQU89810 | Sorghum | extracellular, plastid, vacuole | 39.25 | 37.57 |
| KXG31545 | Sorghum | cytosol | 30.28 | 29.78 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:8069975 |
| UniProt:C5XUQ6 | EnsemblPlants:EES06282 | ProteinID:EES06282 | ProteinID:EES06282.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_9 |
| InterPro:IPR012341 | PFAM:PF00759 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF53 | MetaCyc:PWY-6788 | EnsemblPlantsGene:SORBI_3004G042700 |
| SUPFAM:SSF48208 | TMHMM:TMhelix | UniParc:UPI0001A859E9 | RefSeq:XP_002453306.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:3495211..3498878
Molecular Weight (calculated)
57985.5 Da
IEP (calculated)
5.186
GRAVY (calculated)
-0.228
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVSVRFVV AVAVAAVAAI SLAAAVSAAS AAHDYGDALH KSLLYFEAQR SGRLPYNQRV RWRGHSGLTD GLEQGVDLVG GYYDAGDHVK FGLPMAFTVT
101: LLSWGMLEYG GGVADAGELA HALQAIKWGT DYFVKAHTAP TELWAQVGDG DSDHYCWQRP EDMTTSRRAY KVDAEHPGSE VAAETAAAMA AASAVFRAAG
201: DAHYAHLLLH HAQQLFDFAD TYRGRYDDSV DVVKSYYPSS SGYQDELLWA ALWLHRVTGR RDYLRYALDN AEAFGGTGWA VSEFSWDIKY AGLQVLASQL
301: LVEAKEQRLR LSAEEVAVVE QLRSKAEYYV CSCMNRNPGG AKHNAGRTPA GLLFIRPWNN LQYASGAAFL LTVYSDVLSS LDQPLRCGGS GDDDGEPAAA
401: GDAGEVLAFA KSQADYILGT NPMRTSYLVG YGAAYPRQVH HRAASSASYS HDRDFIGCLQ GFDSWYSARR ENPNDLVGAV VGGPNGEDVF NDQRGAYMQT
501: EACTYNTAPM VGVFSKLMQL EGQSPRPAPA PAEDL
101: LLSWGMLEYG GGVADAGELA HALQAIKWGT DYFVKAHTAP TELWAQVGDG DSDHYCWQRP EDMTTSRRAY KVDAEHPGSE VAAETAAAMA AASAVFRAAG
201: DAHYAHLLLH HAQQLFDFAD TYRGRYDDSV DVVKSYYPSS SGYQDELLWA ALWLHRVTGR RDYLRYALDN AEAFGGTGWA VSEFSWDIKY AGLQVLASQL
301: LVEAKEQRLR LSAEEVAVVE QLRSKAEYYV CSCMNRNPGG AKHNAGRTPA GLLFIRPWNN LQYASGAAFL LTVYSDVLSS LDQPLRCGGS GDDDGEPAAA
401: GDAGEVLAFA KSQADYILGT NPMRTSYLVG YGAAYPRQVH HRAASSASYS HDRDFIGCLQ GFDSWYSARR ENPNDLVGAV VGGPNGEDVF NDQRGAYMQT
501: EACTYNTAPM VGVFSKLMQL EGQSPRPAPA PAEDL
001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR
Arabidopsis Description
AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.