CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035442_P001	Maize	extracellular, vacuole	87.92	82.01
TraesCS1D01G075100.1	Wheat	vacuole	67.35	53.47
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	66.84	53.06
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	66.32	52.65
TraesCS1A01G072100.1	Wheat	nucleus	66.32	52.65
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	69.15	52.54
TraesCS1A01G072300.1	Wheat	vacuole	66.07	52.02
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	61.7	51.72
HORVU1Hr1G015550.1	Barley	vacuole	65.04	51.63
TraesCS1D01G074800.1	Wheat	vacuole	59.13	49.57
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	54.24	46.99
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	56.04	45.13
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	54.24	43.96
OQU76161	Sorghum	vacuole	48.84	43.08
PGSC0003DMT400069884	Potato	extracellular, vacuole	52.44	42.59
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	53.21	42.24
CDX74666	Canola	vacuole	52.7	41.92
Bra004846.1-P	Field mustard	nucleus	50.64	41.91
Bra004845.1-P	Field mustard	extracellular	52.19	41.51
AT2G44570.1	Thale cress	extracellular	52.44	41.46
AT2G44540.1	Thale cress	vacuole	52.19	41.34
CDY47675	Canola	vacuole	51.67	41.1
AT2G44560.1	Thale cress	extracellular, vacuole	51.41	40.73
CDX83426	Canola	extracellular, plastid, vacuole	49.87	40.5
CDY47674	Canola	extracellular, vacuole	51.16	40.37
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	49.36	40.34
CDX74664	Canola	extracellular, vacuole	50.64	40.29
CDX74668	Canola	extracellular	50.9	40.16
Bra004844.1-P	Field mustard	extracellular, vacuole	50.39	40.08
KRG89135	Soybean	extracellular	49.87	40.0
Solyc05g052530.1.1	Tomato	extracellular	49.87	39.92
CDX74667	Canola	extracellular, vacuole	43.96	39.49
CDX95605	Canola	extracellular, vacuole	50.64	39.48
EES04405	Sorghum	plasma membrane, vacuole	49.36	37.35
EES15002	Sorghum	endoplasmic reticulum, extracellular	48.33	37.15
EER98860	Sorghum	golgi, mitochondrion, vacuole	50.64	36.35
EES00659	Sorghum	vacuole	46.53	36.13
EES13257	Sorghum	extracellular	46.02	35.66
EES13778	Sorghum	extracellular	46.53	35.01
EES06282	Sorghum	extracellular, vacuole	48.07	34.95
EES07307	Sorghum	vacuole	43.96	33.93
EES05890	Sorghum	vacuole	42.67	33.4
EES12225	Sorghum	plastid	43.7	33.01
EES13091	Sorghum	vacuole	51.16	31.59
EES19222	Sorghum	vacuole	50.13	31.1
EER89549	Sorghum	mitochondrion	44.22	30.61
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	50.13	29.82
OQU89810	Sorghum	extracellular, plastid, vacuole	41.39	28.8
KXG31545	Sorghum	cytosol	35.99	25.74
EES07289	Sorghum	mitochondrion	48.33	24.8

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1B6P668
GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EnsemblPlants:KXG21209	ProteinID:KXG21209
ProteinID:KXG21209.1	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	MetaCyc:PWY-6788
EnsemblPlantsGene:SORBI_3009G029800	SUPFAM:SSF48208	UniParc:UPI00081AC990	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:2663034..2664411

Molecular Weight (calculated)

41556.7 Da

IEP (calculated)

5.957

GRAVY (calculated)

-0.160

Length

389 amino acids

Sequence
(BLAST)

001: MLAWSVVEHE RPLAAAGELR NALAAVRWGA DYLARAHAAD ETLYVQVGDG DSDHSCWQRP EDMDTPRTSY SVDASRPGSD VAGETAAALA AASVAFRQFD
101: PGFSAMLLGH AEQLFRFAKI HRGLYQNSVP EAAKFYPSRG DEDELIWAAV WLFIATGGED YKAFIAGDGN VGGAQTSFSW DNKFVGAQAL VAKLILEGKL
201: PDAGNAAAMK RHLEEFLCGV LEHNRLSPGG VLWLESWNNL QYVTPAAFVV AAHADHLASA AAAAAALRCG GAAQLLAFAR SQADYILGAN PERMSYMVGY
301: GTRFPEQVHH RGASVPSIKS SPGKVTCKGG FGYLSRDGPN PNVLVGAIVG GPDGSDRYDD SRQNYQQTEP STVTVAPMVG VLARLSQRN

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.