Factsheet for Bra004844.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74664	Canola	extracellular, vacuole	98.77	98.77
CDX74667	Canola	extracellular, vacuole	87.12	98.38
Bra004845.1-P	Field mustard	extracellular	86.3	86.3
Bra004846.1-P	Field mustard	nucleus	74.64	77.66
AT2G44560.1	Thale cress	extracellular, vacuole	75.05	74.75
AT2G44540.1	Thale cress	vacuole	74.85	74.54
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	72.6	72.45
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	68.3	70.17
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	60.12	60.87
PGSC0003DMT400069884	Potato	extracellular, vacuole	57.67	58.87
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	57.46	58.54
Solyc05g052530.1.1	Tomato	extracellular	57.46	57.82
KRG89135	Soybean	extracellular	56.65	57.11
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	50.1	54.57
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	48.47	51.08
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	51.12	51.02
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	50.92	50.82
TraesCS1D01G075100.1	Wheat	vacuole	50.72	50.61
KXG21209	Sorghum	cytosol	40.08	50.39
TraesCS1A01G072300.1	Wheat	vacuole	50.31	49.8
TraesCS1A01G072100.1	Wheat	nucleus	49.69	49.59
HORVU1Hr1G015550.1	Barley	vacuole	49.28	49.18
TraesCS1D01G074800.1	Wheat	vacuole	46.63	49.14
Bra019296.1-P	Field mustard	extracellular, vacuole	46.83	47.71
Zm00001d035442_P001	Maize	extracellular, vacuole	40.49	47.48
Bra013709.1-P	Field mustard	extracellular	45.6	46.46
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.92	46.38
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	48.47	46.29
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	45.6	46.07
Bra019455.1-P	Field mustard	golgi, vacuole	45.4	45.68
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	44.58	45.13
Bra032584.1-P	Field mustard	extracellular, vacuole	47.65	45.07
Bra007982.1-P	Field mustard	extracellular	44.58	45.04
Bra005536.1-P	Field mustard	vacuole	47.44	44.44
Bra007983.1-P	Field mustard	extracellular	43.76	44.31
Bra011881.1-P	Field mustard	cytosol	42.94	44.21
Bra021821.1-P	Field mustard	vacuole	45.6	43.81
Bra003946.1-P	Field mustard	extracellular	43.56	43.65
Bra011882.1-P	Field mustard	extracellular	43.56	43.29
Bra016192.1-P	Field mustard	extracellular, vacuole	44.17	43.29
Bra024571.1-P	Field mustard	extracellular	43.35	42.91
Bra018559.1-P	Field mustard	extracellular, vacuole	44.99	42.8
Bra033592.1-P	Field mustard	extracellular	42.74	42.48
Bra036281.1-P	Field mustard	extracellular, vacuole	44.99	42.47
Bra033591.1-P	Field mustard	extracellular, vacuole	42.13	42.04
Bra032270.1-P	Field mustard	extracellular	50.31	40.39
Bra018765.1-P	Field mustard	vacuole	50.31	39.42
Bra027735.1-P	Field mustard	extracellular, vacuole	49.69	39.19
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.69	39.13

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra004844
EnsemblPlants:Bra004844.1	EnsemblPlants:Bra004844.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
UniProt:M4CKV8	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208
SignalP:SignalP-noTM	UniParc:UPI0002547D3A	SEG:seg	:	:	:

Description

AT2G44560 (E=2e-212) AtGH9B11 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA05:-:2107659..2109389

Molecular Weight (calculated)

53844.1 Da

IEP (calculated)

5.696

GRAVY (calculated)

-0.337

Length

489 amino acids

Sequence
(BLAST)

001: MSQLRSGSSQ CLWTSTLLIV LLSMPMTHGT NYGEALTKSL LYFEAQRSGK LPPNQRVNWR GDSALRDGSD AHVDLTGGYY DAGDNMKFGF PMAFTTTMLA
101: WSSVEWESEL KAHKEHRNVL DAIKWATDYF IKAHPEPNVL YGQVGDGKSD HACWMRPEDM TTPRPSYRID AQHPGADLAG ETAAAMAAAS LAFRKYDEAY
201: AEELIGHAKD LFEFAKAYPG VYHSSITDAG AFYPSSGYQD ELFWAAAWLH RATKSQTYLD YLTDVYGTGG QRTVFAWDDK FVGAQVLIAK LALEREGMFN
301: DKLEDYKNMA EYFICNCVQM GSNNVKVTPG GLLWFLPWNN FQYTPTASFV LAAYSKYLNA TKKPIDCPSG TFEAADLLHH ARVQADYILG SNPKSMSYMV
401: GFGTNYPKSP HHRGASIVSI KNSSTPVTCT GGFNDWYNNP APNPNELTGA LVGGPNEIDG YGDERTDIQH GEPGLSTVGP FVGVLAAVA

Best Arabidopsis Sequence Match ( AT2G44540.1 )
(BLAST)

001: MSQSKNGSSQ CLWTSICIVV LVMSMARGAV STNYAEALQK SLLYFEAQRS GKLPPNQKVT WRGDSALKDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMGS ELRAHHEQGN SLRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPFDK
201: AYANILIGHA KDLFAFAKAH PGLYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LNYLTQASGT GGPRSVFAWD DKFVGAQVLM AKLALERKVG
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTTAS FVLSAYSKYL TKAKASIQCP KGALQASDLL QIARSQVDYI LGSNPQKMSY
401: MVGVGTNYPK KPHHRAASIV SIRKDKTPVT CSGGYDKWYN NPAPNPNVLM GALVGGPNEN DVYGDERSNF QQAEPATVTV APFVGVLAAV F

Arabidopsis Description

AtGH9B9Endoglucanase 12 [Source:UniProtKB/Swiss-Prot;Acc:O64889]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.