Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44540.1 | Thale cress | vacuole | 91.43 | 91.24 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 86.53 | 86.35 |
| CDX74668 | Canola | extracellular | 78.37 | 77.89 |
| Bra004846.1-P | Field mustard | nucleus | 74.49 | 77.66 |
| CDY47674 | Canola | extracellular, vacuole | 77.96 | 77.48 |
| CDY47675 | Canola | vacuole | 75.51 | 75.66 |
| AT2G44570.1 | Thale cress | extracellular | 75.92 | 75.61 |
| CDX74666 | Canola | vacuole | 74.69 | 74.85 |
| CDX74667 | Canola | extracellular, vacuole | 66.12 | 74.83 |
| Bra004845.1-P | Field mustard | extracellular | 74.29 | 74.44 |
| CDX74664 | Canola | extracellular, vacuole | 72.86 | 73.01 |
| Bra004844.1-P | Field mustard | extracellular, vacuole | 72.45 | 72.6 |
| VIT_13s0067g01190.t01 | Wine grape | extracellular, vacuole | 62.86 | 63.77 |
| VIT_13s0067g01200.t01 | Wine grape | extracellular, vacuole | 61.22 | 62.5 |
| KRG89135 | Soybean | extracellular | 61.84 | 62.47 |
| PGSC0003DMT400069884 | Potato | extracellular, vacuole | 59.8 | 61.17 |
| Solyc05g052530.1.1 | Tomato | extracellular | 59.39 | 59.88 |
| GSMUA_Achr6P15630_001 | Banana | extracellular, vacuole | 54.69 | 59.69 |
| TraesCS1D01G074700.1 | Wheat | extracellular, vacuole | 55.51 | 55.51 |
| TraesCS1D01G075100.1 | Wheat | vacuole | 55.51 | 55.51 |
| TraesCS1A01G072300.1 | Wheat | vacuole | 55.71 | 55.26 |
| TraesCS1B01G090700.1 | Wheat | extracellular, vacuole | 55.1 | 55.1 |
| TraesCS1A01G072100.1 | Wheat | nucleus | 54.9 | 54.9 |
| TraesCS1D01G074900.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 51.63 | 54.53 |
| HORVU1Hr1G015550.1 | Barley | vacuole | 54.49 | 54.49 |
| TraesCS1D01G074800.1 | Wheat | vacuole | 51.02 | 53.88 |
| KXG21209 | Sorghum | cytosol | 42.24 | 53.21 |
| Zm00001d035442_P001 | Maize | extracellular, vacuole | 43.47 | 51.08 |
| Os05t0129200-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 52.86 | 50.59 |
| AT4G23560.1 | Thale cress | extracellular | 47.96 | 49.06 |
| AT4G09740.1 | Thale cress | extracellular | 45.92 | 47.07 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 47.96 | 46.91 |
| AT1G70710.1 | Thale cress | vacuole | 46.33 | 46.14 |
| AT1G71380.1 | Thale cress | extracellular | 45.31 | 45.87 |
| AT1G22880.1 | Thale cress | extracellular | 44.9 | 45.45 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 45.31 | 45.4 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 48.57 | 45.33 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 44.29 | 44.65 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 45.1 | 44.47 |
| AT4G02290.1 | Thale cress | plastid | 46.33 | 43.99 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 43.88 | 43.61 |
| AT4G11050.1 | Thale cress | vacuole | 52.45 | 41.05 |
| AT1G48930.1 | Thale cress | vacuole | 51.84 | 40.51 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:819063 |
| ProteinID:AAC27457.1 | ProteinID:AAM14964.1 | ProteinID:AEC10437.1 | ArrayExpress:AT2G44550 | EnsemblPlantsGene:AT2G44550 | RefSeq:AT2G44550 |
| TAIR:AT2G44550 | RefSeq:AT2G44550-TAIR-G | EnsemblPlants:AT2G44550.1 | TAIR:AT2G44550.1 | Unigene:At.53122 | Symbol:AtGH9B10 |
| GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 |
| InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | RefSeq:NP_181983.1 | UniProt:O64890 | PFAM:PF00759 | ScanProsite:PS00592 |
| PANTHER:PTHR22298 | PANTHER:PTHR22298:SF12 | SUPFAM:SSF48208 | SignalP:SignalP-noTM | UniParc:UPI000009C766 | SEG:seg |
Description
AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
Coordinates
chr2:-:18389381..18391142
Molecular Weight (calculated)
53451.0 Da
IEP (calculated)
6.290
GRAVY (calculated)
-0.273
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.