Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21424 | Canola | extracellular | 91.41 | 90.49 |
| Bra024571.1-P | Field mustard | extracellular | 91.41 | 90.49 |
| CDY04737 | Canola | extracellular, vacuole | 90.59 | 90.04 |
| AT1G70710.1 | Thale cress | vacuole | 85.07 | 84.55 |
| KRH60381 | Soybean | nucleus | 77.71 | 77.24 |
| KRH41678 | Soybean | nucleus | 77.51 | 77.19 |
| Solyc09g010210.2.1 | Tomato | plastid | 75.66 | 75.66 |
| PGSC0003DMT400023082 | Potato | extracellular, vacuole | 75.66 | 75.66 |
| GSMUA_Achr5P05960_001 | Banana | extracellular, vacuole | 71.98 | 70.54 |
| TraesCS6B01G325400.1 | Wheat | extracellular | 71.17 | 70.16 |
| TraesCS6A01G295300.1 | Wheat | extracellular | 71.17 | 70.16 |
| HORVU6Hr1G073570.3 | Barley | extracellular | 71.17 | 70.02 |
| TraesCS7D01G207600.1 | Wheat | extracellular | 71.17 | 69.74 |
| HORVU7Hr1G041610.1 | Barley | vacuole | 71.57 | 69.72 |
| Os06t0256900-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 70.55 | 69.42 |
| Os02t0733300-01 | Rice | extracellular | 71.98 | 69.29 |
| TraesCS6D01G275900.1 | Wheat | extracellular | 70.55 | 69.28 |
| TraesCS7A01G204500.1 | Wheat | extracellular | 71.17 | 69.18 |
| EES07307 | Sorghum | vacuole | 70.35 | 68.25 |
| Zm00001d017949_P001 | Maize | extracellular | 66.87 | 67.42 |
| Zm00001d037338_P001 | Maize | vacuole | 68.51 | 67.0 |
| TraesCS7B01G111700.1 | Wheat | extracellular | 71.37 | 66.1 |
| EER89549 | Sorghum | mitochondrion | 69.33 | 60.32 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 58.28 | 56.89 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 57.06 | 56.14 |
| AT4G02290.1 | Thale cress | plastid | 58.69 | 55.62 |
| AT1G22880.1 | Thale cress | extracellular | 53.99 | 54.55 |
| AT1G71380.1 | Thale cress | extracellular | 52.56 | 53.1 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 52.15 | 51.72 |
| AT4G23560.1 | Thale cress | extracellular | 47.03 | 48.02 |
| AT4G09740.1 | Thale cress | extracellular | 46.42 | 47.49 |
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 45.4 | 45.31 |
| AT2G44570.1 | Thale cress | extracellular | 44.79 | 44.51 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 44.17 | 43.99 |
| AT2G44540.1 | Thale cress | vacuole | 43.97 | 43.79 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 43.35 | 43.62 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 46.63 | 43.43 |
| AT4G11050.1 | Thale cress | vacuole | 49.08 | 38.34 |
| AT1G48930.1 | Thale cress | vacuole | 43.97 | 34.29 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:838930 |
| ProteinID:AAC00616.1 | ProteinID:AAF86995.1 | ProteinID:AEE30357.1 | ArrayExpress:AT1G23210 | EnsemblPlantsGene:AT1G23210 | RefSeq:AT1G23210 |
| TAIR:AT1G23210 | RefSeq:AT1G23210-TAIR-G | EnsemblPlants:AT1G23210.1 | TAIR:AT1G23210.1 | Unigene:At.51731 | Symbol:AtGH9B6 |
| EMBL:BT026379 | EMBL:DQ056459 | GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 |
| GO:GO:0071555 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | RefSeq:NP_173735.1 |
| UniProt:O49296 | PFAM:PF00759 | PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00592 | ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF28 | SUPFAM:SSF48208 |
| SignalP:SignalP-noTM | UniParc:UPI000009DF8D | SEG:seg | : | : | : |
Description
AtGH9B6Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296]
Coordinates
chr1:+:8240145..8242261
Molecular Weight (calculated)
54633.2 Da
IEP (calculated)
7.884
GRAVY (calculated)
-0.234
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKSFMTPA IMLAMLLLIS PETYAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLTGGYYDAG DNVKFGFPMA FTTTMMSWSV
101: IDFGKTMGPE LENAVKAIKW GTDYLMKATQ IPDVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDKDHSG SEVAGETAAA LAAASIVFEK RDPVYSKMLL
201: DRATRVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL WGAAWLHKAS KKRVYREFIV KNQVILRAGD TIHEFGWDNK HAGINVLVSK MVLMGKAEYF
301: QSFKQNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL TYSNYLSHAN KVVPCGEFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY
401: GSRFPQKIHH RGSSVPSVVD HPDRIGCKDG SRYFFSNNPN PNLLIGAVVG GPNITDDFPD SRPYFQLTEP TTYINAPLLG LLGYFSAHY
101: IDFGKTMGPE LENAVKAIKW GTDYLMKATQ IPDVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDKDHSG SEVAGETAAA LAAASIVFEK RDPVYSKMLL
201: DRATRVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL WGAAWLHKAS KKRVYREFIV KNQVILRAGD TIHEFGWDNK HAGINVLVSK MVLMGKAEYF
301: QSFKQNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL TYSNYLSHAN KVVPCGEFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY
401: GSRFPQKIHH RGSSVPSVVD HPDRIGCKDG SRYFFSNNPN PNLLIGAVVG GPNITDDFPD SRPYFQLTEP TTYINAPLLG LLGYFSAHY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.