Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41678 | Soybean | nucleus | 97.15 | 97.35 |
| AT1G70710.1 | Thale cress | vacuole | 80.69 | 80.69 |
| Bra003946.1-P | Field mustard | extracellular | 79.88 | 80.53 |
| CDX68334 | Canola | endoplasmic reticulum | 79.88 | 80.53 |
| CDY23486 | Canola | extracellular | 79.47 | 80.12 |
| Bra016192.1-P | Field mustard | extracellular, vacuole | 80.28 | 79.16 |
| CDX96271 | Canola | extracellular, vacuole | 80.28 | 79.16 |
| CDY11552 | Canola | endoplasmic reticulum, extracellular | 79.88 | 78.76 |
| PGSC0003DMT400023082 | Potato | extracellular, vacuole | 78.05 | 78.53 |
| Solyc09g010210.2.1 | Tomato | plastid | 77.64 | 78.12 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 77.24 | 77.71 |
| CDY21424 | Canola | extracellular | 76.02 | 75.71 |
| Bra024571.1-P | Field mustard | extracellular | 76.02 | 75.71 |
| CDY04737 | Canola | extracellular, vacuole | 75.61 | 75.61 |
| GSMUA_Achr5P05960_001 | Banana | extracellular, vacuole | 75.2 | 74.15 |
| HORVU6Hr1G073570.3 | Barley | extracellular | 72.36 | 71.63 |
| TraesCS6D01G275900.1 | Wheat | extracellular | 72.36 | 71.49 |
| EES07307 | Sorghum | vacuole | 73.17 | 71.43 |
| Os06t0256900-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 72.15 | 71.43 |
| TraesCS6A01G295300.1 | Wheat | extracellular | 71.75 | 71.17 |
| TraesCS6B01G325400.1 | Wheat | extracellular | 71.75 | 71.17 |
| Zm00001d017949_P001 | Maize | extracellular | 69.51 | 70.52 |
| Zm00001d037338_P001 | Maize | vacuole | 71.34 | 70.2 |
| Os02t0733300-01 | Rice | extracellular | 72.36 | 70.08 |
| TraesCS7D01G207600.1 | Wheat | extracellular | 70.73 | 69.74 |
| HORVU7Hr1G041610.1 | Barley | vacuole | 71.14 | 69.72 |
| TraesCS7A01G204500.1 | Wheat | extracellular | 70.73 | 69.18 |
| TraesCS7B01G111700.1 | Wheat | extracellular | 70.94 | 66.1 |
| EER89549 | Sorghum | mitochondrion | 73.17 | 64.06 |
| KRH31855 | Soybean | nucleus | 60.57 | 59.01 |
| KRH39987 | Soybean | extracellular, vacuole | 59.15 | 58.91 |
| KRH60771 | Soybean | extracellular, vacuole | 58.74 | 58.86 |
| KRH68213 | Soybean | nucleus | 59.76 | 58.8 |
| KRH51463 | Soybean | extracellular | 58.94 | 58.7 |
| KRH23800 | Soybean | extracellular, vacuole | 58.74 | 58.15 |
| KRH69273 | Soybean | extracellular, vacuole | 59.76 | 57.99 |
| KRH23799 | Soybean | extracellular, nucleus, vacuole | 48.98 | 57.93 |
| KRG96467 | Soybean | extracellular, vacuole | 48.37 | 57.21 |
| KRH55742 | Soybean | vacuole | 55.89 | 56.58 |
| KRH29353 | Soybean | extracellular, vacuole | 57.11 | 55.98 |
| KRH56424 | Soybean | extracellular, vacuole | 53.05 | 53.93 |
| KRG97785 | Soybean | extracellular | 54.88 | 53.57 |
| KRH62487 | Soybean | extracellular, vacuole | 52.64 | 53.51 |
| KRG89135 | Soybean | extracellular | 45.53 | 46.19 |
| KRH27886 | Soybean | extracellular | 47.97 | 46.18 |
| KRH14764 | Soybean | cytosol, nucleus, vacuole | 36.79 | 44.58 |
| KRH52260 | Soybean | extracellular, vacuole | 42.89 | 43.69 |
| KRH73374 | Soybean | vacuole | 46.14 | 43.32 |
| KRH52262 | Soybean | extracellular, vacuole | 42.28 | 43.06 |
| KRH73794 | Soybean | vacuole | 43.9 | 41.94 |
| KRH14332 | Soybean | vacuole | 43.7 | 40.41 |
| KRH60035 | Soybean | nucleus | 49.8 | 39.26 |
| KRH41305 | Soybean | nucleus | 49.59 | 39.04 |
| KRH29156 | Soybean | extracellular, vacuole | 47.36 | 37.16 |
| KRH24186 | Soybean | extracellular, vacuole | 47.15 | 36.88 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | EntrezGene:100804372 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf |
| EMBL:ACUP02003364 | EnsemblPlantsGene:GLYMA_05G236400 | GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS |
| UniProt:I1K5N5 | InterPro:IPR012341 | EnsemblPlants:KRH60381 | ProteinID:KRH60381 | ProteinID:KRH60381.1 | PFAM:PF00759 |
| ScanProsite:PS00592 | ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF28 | MetaCyc:PWY-6788 | SUPFAM:SSF48208 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233A881 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:-:41274513..41279615
Molecular Weight (calculated)
54010.2 Da
IEP (calculated)
8.434
GRAVY (calculated)
-0.139
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPNALFLFS VLAIPLLLLP CPTAAGHDYR DALRKSILFF EGQRSGKLPA DQRLRWRHDS ALHDGATAGV DLSGGYYDAG DNIKFGFPMA FSTTMLSWSV
101: IDFEKSMGTE LGNALKAVRW GTDYLLKATA KIGSGVVFVQ VGDPYSDHNC WERPEDMDTL RTVFKIDGSH PGSDVAGETA AALAAASIVF RSRDPSYSTM
201: LLNRAVAVFQ FADKHRGAYS NSLHRAVCPF YCDVNGYQDE LLWAAAWLHK ASRRRQYREY IVRNEVVLRA GDTINEFGWD NKHAGINVLI SKEVLMGRAE
301: YFASFKQNAD GFICSTLPGI SHPQVQYSPG GLIFKAGGSN MQHVTSLSFL LLAYSNYLSH ANKVVPCGET TATPALLKHL AKRQVDYILG DNPLGMSYMV
401: GYGARYPQRI HHRASSLPSV AAHPAHIGCK AGSRYYFSPN PNPNVLLGAV VGGPTNNTDS FPDSRPFFQQ SEPTTYINAP LVGLLAFFSA HY
101: IDFEKSMGTE LGNALKAVRW GTDYLLKATA KIGSGVVFVQ VGDPYSDHNC WERPEDMDTL RTVFKIDGSH PGSDVAGETA AALAAASIVF RSRDPSYSTM
201: LLNRAVAVFQ FADKHRGAYS NSLHRAVCPF YCDVNGYQDE LLWAAAWLHK ASRRRQYREY IVRNEVVLRA GDTINEFGWD NKHAGINVLI SKEVLMGRAE
301: YFASFKQNAD GFICSTLPGI SHPQVQYSPG GLIFKAGGSN MQHVTSLSFL LLAYSNYLSH ANKVVPCGET TATPALLKHL AKRQVDYILG DNPLGMSYMV
401: GYGARYPQRI HHRASSLPSV AAHPAHIGCK AGSRYYFSPN PNPNVLLGAV VGGPTNNTDS FPDSRPFFQQ SEPTTYINAP LVGLLAFFSA HY
001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR
Arabidopsis Description
CEL1Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.