Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 6
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60035 | Soybean | nucleus | 96.8 | 96.96 |
| VIT_02s0025g01380.t01 | Wine grape | extracellular, vacuole | 81.6 | 81.08 |
| CDY34422 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.04 | 79.68 |
| Bra027699.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 79.04 | 79.55 |
| CDY47849 | Canola | extracellular, vacuole | 78.72 | 79.35 |
| Bra027735.1-P | Field mustard | extracellular, vacuole | 78.56 | 79.19 |
| CDY46529 | Canola | extracellular, vacuole | 78.4 | 78.91 |
| PGSC0003DMT400012809 | Potato | extracellular, vacuole | 66.56 | 77.04 |
| PGSC0003DMT400032028 | Potato | endoplasmic reticulum, extracellular, vacuole | 76.64 | 76.64 |
| Solyc08g082250.2.1 | Tomato | extracellular | 76.48 | 76.48 |
| CDY08373 | Canola | cytosol, extracellular, mitochondrion, nucleus | 51.36 | 76.07 |
| AT4G11050.1 | Thale cress | vacuole | 75.84 | 75.72 |
| CDX90780 | Canola | endoplasmic reticulum, extracellular | 75.04 | 74.92 |
| CDY05130 | Canola | extracellular, vacuole | 74.4 | 74.28 |
| GSMUA_Achr4P08520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 68.16 | 72.82 |
| Solyc12g055970.1.1 | Tomato | cytosol, nucleus | 52.64 | 71.21 |
| TraesCS1D01G397400.1 | Wheat | extracellular, vacuole | 61.6 | 62.1 |
| Os01t0220100-01 | Rice | extracellular, vacuole | 63.52 | 62.03 |
| TraesCS4B01G104500.1 | Wheat | extracellular, vacuole | 61.44 | 61.94 |
| TraesCS1A01G389300.1 | Wheat | extracellular, vacuole | 61.28 | 61.67 |
| Zm00001d010446_P001 | Maize | vacuole | 60.96 | 61.16 |
| Os05t0212300-01 | Rice | extracellular, vacuole | 61.44 | 61.05 |
| EES19222 | Sorghum | vacuole | 60.96 | 60.77 |
| HORVU1Hr1G085830.2 | Barley | vacuole | 60.48 | 60.58 |
| Os01t0219600-00 | Rice | mitochondrion | 61.6 | 60.16 |
| Zm00001d008952_P001 | Maize | extracellular | 62.08 | 60.16 |
| HORVU3Hr1G029470.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 59.52 | 59.71 |
| EES00050 | Sorghum | extracellular, mitochondrion, plastid, vacuole | 62.4 | 59.63 |
| TraesCS3A01G144600.1 | Wheat | extracellular, vacuole | 58.72 | 58.25 |
| KRH73794 | Soybean | vacuole | 47.84 | 58.06 |
| KRH14764 | Soybean | cytosol, nucleus, vacuole | 37.44 | 57.64 |
| KRH73374 | Soybean | vacuole | 48.0 | 57.25 |
| KRH14332 | Soybean | vacuole | 48.0 | 56.39 |
| TraesCS3D01G153400.1 | Wheat | extracellular, mitochondrion, plastid, vacuole | 58.72 | 56.2 |
| KRG89135 | Soybean | extracellular | 42.72 | 55.05 |
| KRH69273 | Soybean | extracellular, vacuole | 41.12 | 50.69 |
| KRH31855 | Soybean | nucleus | 40.8 | 50.49 |
| KRH24186 | Soybean | extracellular, vacuole | 50.56 | 50.24 |
| KRH41678 | Soybean | nucleus | 39.2 | 49.9 |
| KRH29156 | Soybean | extracellular, vacuole | 49.76 | 49.6 |
| KRH60381 | Soybean | nucleus | 39.04 | 49.59 |
| KRH68213 | Soybean | nucleus | 39.52 | 49.4 |
| KRG96467 | Soybean | extracellular, vacuole | 32.32 | 48.56 |
| KRH62487 | Soybean | extracellular, vacuole | 37.44 | 48.35 |
| KXG31545 | Sorghum | cytosol | 42.08 | 48.35 |
| KRH56424 | Soybean | extracellular, vacuole | 37.12 | 47.93 |
| KRH60771 | Soybean | extracellular, vacuole | 37.6 | 47.86 |
| KRH23799 | Soybean | extracellular, nucleus, vacuole | 31.68 | 47.6 |
| KRH51463 | Soybean | extracellular | 37.6 | 47.57 |
| KRG97785 | Soybean | extracellular | 37.28 | 46.23 |
| KRH29353 | Soybean | extracellular, vacuole | 36.96 | 46.02 |
| KRH55742 | Soybean | vacuole | 35.68 | 45.88 |
| KRH52260 | Soybean | extracellular, vacuole | 34.88 | 45.13 |
| KRH39987 | Soybean | extracellular, vacuole | 35.52 | 44.94 |
| KRH23800 | Soybean | extracellular, vacuole | 35.2 | 44.27 |
| KRH52262 | Soybean | extracellular, vacuole | 34.08 | 44.1 |
| KRH27886 | Soybean | extracellular | 35.84 | 43.84 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | EntrezGene:100801949 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf |
| EMBL:ACUP02004759 | InterPro:CBM_49 | EnsemblPlantsGene:GLYMA_08G022300 | GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0030246 |
| InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | UniProt:I1KPJ3 | InterPro:IPR012341 | EnsemblPlants:KRH41305 |
| ProteinID:KRH41305 | ProteinID:KRH41305.1 | PFAM:PF00759 | PFAM:PF09478 | ScanProsite:PS00592 | ScanProsite:PS00698 |
| PANTHER:PTHR22298 | PANTHER:PTHR22298:SF19 | MetaCyc:PWY-6788 | SMART:SM01063 | SUPFAM:SSF48208 | SignalP:SignalP-noTM |
| UniParc:UPI0002338DD1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:1797420..1802973
Molecular Weight (calculated)
68725.9 Da
IEP (calculated)
8.942
GRAVY (calculated)
-0.329
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLIRMFPL LLVLLLCPNF AFAGHDYGQA LSKSLLFFEA QRSGYLPHNQ RVTWRAHSGL QDGKASGVDL VGGYYDAGDN VKFGLPMAFT VTMMSWSIIE
101: YGKQMAASGE LGHAMEAVKW GTDYFIKAHP QANVLYGEVG DGNTDHYCWQ RPEDMTTDRH AYKVDPSNPG SDLAGETAAA MAAASIVFRR SNPAYAGELL
201: RHAYQLFDFA DKYRGKYDSS ITVAQKYYRS ISGYNDELLW AAAWLYQASN NQYYLDYLGR NGDSMGGTGW SMTEFGWDVK YAGVQTLVAK FLMQGKSGHH
301: APVFERYQQK AETFMCSCLG KSNRNVQKTP GGLIFRQRWN NMQFVTSASF LATVYSDYLA SSGRNLRCSS GNVPPAELLS LAKSQVDYLL GDNPRATSYM
401: VGYGSNFPQR VHHRGSSIVS IKVNPSFVSC RGGYATWFSS KRSDPNLLTG ALVGGPDAYD DFADERDNYE QTEPATYNNA PLIGILARLG GGHGGYNQLL
501: PVVVPAPKPA VTKPQPTPSP KTTPSPASWS GPISIEQKRT TSWVANGKTY YRYSTVVTNK SNKSLNSLNL SISKLYGPIW GVTKSGDSYT FPSWLSSLSA
601: GKSLEFVYIH SASPADVSVA NYVLA
101: YGKQMAASGE LGHAMEAVKW GTDYFIKAHP QANVLYGEVG DGNTDHYCWQ RPEDMTTDRH AYKVDPSNPG SDLAGETAAA MAAASIVFRR SNPAYAGELL
201: RHAYQLFDFA DKYRGKYDSS ITVAQKYYRS ISGYNDELLW AAAWLYQASN NQYYLDYLGR NGDSMGGTGW SMTEFGWDVK YAGVQTLVAK FLMQGKSGHH
301: APVFERYQQK AETFMCSCLG KSNRNVQKTP GGLIFRQRWN NMQFVTSASF LATVYSDYLA SSGRNLRCSS GNVPPAELLS LAKSQVDYLL GDNPRATSYM
401: VGYGSNFPQR VHHRGSSIVS IKVNPSFVSC RGGYATWFSS KRSDPNLLTG ALVGGPDAYD DFADERDNYE QTEPATYNNA PLIGILARLG GGHGGYNQLL
501: PVVVPAPKPA VTKPQPTPSP KTTPSPASWS GPISIEQKRT TSWVANGKTY YRYSTVVTNK SNKSLNSLNL SISKLYGPIW GVTKSGDSYT FPSWLSSLSA
601: GKSLEFVYIH SASPADVSVA NYVLA
001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
Arabidopsis Description
AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.