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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90780 Canola endoplasmic reticulum, extracellular 97.28 97.28
AT4G11050.1 Thale cress vacuole 90.73 90.73
CDY47849 Canola extracellular, vacuole 74.6 75.32
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 74.44 75.16
KRH60035 Soybean nucleus 74.76 75.0
CDY46529 Canola extracellular, vacuole 74.28 74.88
KRH41305 Soybean nucleus 74.28 74.4
PGSC0003DMT400012809 Potato extracellular, vacuole 62.3 72.22
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 48.4 71.8
VIT_02s0025g01380.t01 Wine grape extracellular, vacuole 71.89 71.54
Solyc08g082250.2.1 Tomato extracellular 70.77 70.88
PGSC0003DMT400032028 Potato endoplasmic reticulum, extracellular, vacuole 70.45 70.56
GSMUA_Achr4P08520_001 Banana endoplasmic reticulum, extracellular, vacuole 62.78 67.18
Solyc12g055970.1.1 Tomato cytosol, nucleus 48.72 66.02
Os01t0220100-01 Rice extracellular, vacuole 60.86 59.53
Zm00001d010446_P001 Maize vacuole 58.95 59.23
TraesCS1D01G397400.1 Wheat extracellular, vacuole 58.47 59.03
HORVU3Hr1G029470.2 Barley endoplasmic reticulum, extracellular, vacuole 58.47 58.75
EES19222 Sorghum vacuole 58.79 58.69
TraesCS4B01G104500.1 Wheat extracellular, vacuole 57.99 58.55
Os05t0212300-01 Rice extracellular, vacuole 58.79 58.51
TraesCS1A01G389300.1 Wheat extracellular, vacuole 57.99 58.45
Zm00001d008952_P001 Maize extracellular 60.06 58.29
CDY60076 Canola extracellular 22.2 57.44
HORVU1Hr1G085830.2 Barley vacuole 57.19 57.37
TraesCS3A01G144600.1 Wheat extracellular, vacuole 57.67 57.3
CDY17123 Canola vacuole 47.44 56.9
EES00050 Sorghum extracellular, mitochondrion, plastid, vacuole 59.42 56.88
Os01t0219600-00 Rice mitochondrion 57.67 56.41
CDY19428 Canola vacuole 46.96 56.32
CDY19174 Canola vacuole 46.96 55.79
CDY23776 Canola vacuole 46.65 55.51
TraesCS3D01G153400.1 Wheat extracellular, mitochondrion, plastid, vacuole 57.67 55.28
CDX74667 Canola extracellular, vacuole 36.1 52.19
CDY65179 Canola extracellular 51.28 51.28
CDY60075 Canola vacuole 51.28 51.28
CDX74666 Canola vacuole 39.94 51.12
CDX74664 Canola extracellular, vacuole 39.94 51.12
CDY59895 Canola cytosol, vacuole 41.05 50.69
CDX93707 Canola vacuole 50.32 50.48
CDY47675 Canola vacuole 39.14 50.1
CDX68334 Canola endoplasmic reticulum 38.98 50.0
CDY23486 Canola extracellular 38.66 49.59
CDX74668 Canola extracellular 38.82 49.29
CDY32480 Canola extracellular, vacuole 40.1 49.02
CDY21424 Canola extracellular 38.66 48.99
CDX83426 Canola extracellular, plastid, vacuole 37.38 48.85
CDY04737 Canola extracellular, vacuole 38.34 48.78
CDY47674 Canola extracellular, vacuole 38.34 48.68
CDX96271 Canola extracellular, vacuole 38.66 48.5
CDY10895 Canola extracellular 37.06 48.33
CDY11552 Canola endoplasmic reticulum, extracellular 38.5 48.3
CDX97262 Canola vacuole 39.62 48.25
CDY37459 Canola endoplasmic reticulum, extracellular 38.98 47.84
CDX94202 Canola vacuole 36.58 47.71
CDY10945 Canola extracellular, vacuole 36.58 47.71
CDY44116 Canola extracellular 36.58 47.71
CDY52780 Canola extracellular, vacuole 39.46 47.68
CDY22043 Canola extracellular, vacuole 39.46 47.68
CDY12503 Canola extracellular, vacuole 36.42 47.2
CDY42599 Canola cytosol 35.78 47.16
CDX72723 Canola extracellular 37.06 47.15
CDY22399 Canola extracellular 36.9 46.95
CDY66787 Canola extracellular, plastid, vacuole 36.26 46.9
CDX95605 Canola extracellular, vacuole 37.38 46.89
CDY25758 Canola extracellular, vacuole 36.1 46.79
CDY12319 Canola cytosol, extracellular, vacuole 36.26 46.71
CDX87948 Canola extracellular, vacuole 36.26 46.71
CDX96319 Canola extracellular, plastid, vacuole 36.1 46.69
CDY41954 Canola vacuole 34.34 46.04
CDY22400 Canola extracellular, vacuole 34.03 45.81
CDY03686 Canola extracellular 35.3 45.76
CDY21221 Canola golgi, vacuole 35.46 45.68
CDY30943 Canola golgi, vacuole 35.46 45.68
CDY41955 Canola extracellular, vacuole 36.1 45.66
CDY37936 Canola extracellular 33.23 45.61
CDY42597 Canola extracellular 34.03 45.61
KXG31545 Sorghum cytosol 39.46 45.4
CDY37939 Canola extracellular, vacuole 34.5 44.72
CDY03687 Canola extracellular 34.34 44.42
CDY01915 Canola cytosol 23.96 41.32
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078ET52
InterPro:CBM_49EnsemblPlants:CDY05130ProteinID:CDY05130ProteinID:CDY05130.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810
GO:GO:0016787GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00119915001InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341PFAM:PF00759PFAM:PF09478ScanProsite:PS00592ScanProsite:PS00698PANTHER:PTHR22298
PANTHER:PTHR22298:SF19MetaCyc:PWY-6788SMART:SM01063SUPFAM:SSF48208SignalP:SignalP-noTMUniParc:UPI0004EF299A
SEG:seg:::::
Description
BnaC03g29280D
Coordinates
chrLK031959:-:903721..908071
Molecular Weight (calculated)
69448.9 Da
IEP (calculated)
9.387
GRAVY (calculated)
-0.428
Length
626 amino acids
Sequence
(BLAST)
001: MGSSTSTISV LLFLGLVQFA VSGHDYKQAL SKSILFFEAQ RSGHLPPNQR VSWRSHSGLN DGKSIGVDLV GGYYDAGDNV KFGLPMAFTV TTMCWSIIEY
101: GGQLASNGEL GNAIDAIKWG TDYFIKAHPE PNVLYGEVGD GKSDHYCWQR PEEMTTDRRA YKLDRNNPGS DLAGETAAAM AAASIVFRRS DPSYSAELLR
201: HAHELFEFAD KYRGKYDSSI TVAQKYYGSV SGYNDELLWA AAWLYQATND RYYLDYLGKN GDSMGGTAWS MREFGWDVKY AGVQTLVAKI LMQGKAGEHT
301: AVFERYQEKA EQFMCSMLGK STKNIQKTPG GLIFRQRWNN MQFVTSASFL AAVYSDYLSS SKRNLRCSQG NISPSKLLDF SKSQVDYILG DNPRGTSYMV
401: GYGHNYPRQV HHRGSSIVSF KVDQKFVTCR GGYATWYSRK ASDPNVLTGA LVGGPDAYDN FADNRDNYEQ TEPTTYNNAP LLGVLARLIS GPTDFDQRLP
501: GVSPTPSPVI IKPAPIPKRK PTTPPAPASS PSPITISQKM TSSWINEGNV YYRYSTKLTN RSTKRLKNLK ISITKLYGPI WGVTKTGNSY GFPSWMKYLP
601: AGKSMEFVYI HSAAPANVLV SNYSLE
Best Arabidopsis Sequence Match ( AT4G11050.1 )
(BLAST)
001: MGSRTTISIL VVLLLGLVQL AISGHDYKQA LSKSILFFEA QRSGHLPPNQ RVSWRSHSGL YDGKSSGVDL VGGYYDAGDN VKFGLPMAFT VTTMCWSIIE
101: YGGQLESNGE LGHAIDAVKW GTDYFIKAHP EPNVLYGEVG DGKSDHYCWQ RPEEMTTDRR AYKIDRNNPG SDLAGETAAA MAAASIVFRR SDPSYSAELL
201: RHAHQLFEFA DKYRGKYDSS ITVAQKYYRS VSGYNDELLW AAAWLYQATN DKYYLDYLGK NGDSMGGTGW SMTEFGWDVK YAGVQTLVAK VLMQGKGGEH
301: TAVFERYQQK AEQFMCSLLG KSTKNIKKTP GGLIFRQSWN NMQFVTSASF LATVYSDYLS YSKRDLLCSQ GNISPSQLLE FSKSQVDYIL GDNPRATSYM
401: VGYGENYPRQ VHHRGSSIVS FNVDQKFVTC RGGYATWFSR KGSDPNVLTG ALVGGPDAYD NFADQRDNYE QTEPATYNNA PLLGVLARLI SGSTGFDQLL
501: PGVSPTPSPV IIKPAPVPQR KPTKPPAASS PSPITISQKM TNSWKNEGKV YYRYSTILTN RSTKTLKILK ISITKLYGPI WGVTKTGNSF SFPSWMQSLP
601: SGKSMEFVYI HSASPADVLV SNYSLE
Arabidopsis Description
AtGH9C3Endoglucanase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7I0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.