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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21424 Canola extracellular 98.37 97.98
AT1G23210.1 Thale cress endoplasmic reticulum, extracellular, vacuole 90.04 90.59
CDX68334 Canola endoplasmic reticulum 82.93 83.61
CDY23486 Canola extracellular 82.72 83.4
CDX96271 Canola extracellular, vacuole 83.94 82.77
CDY11552 Canola endoplasmic reticulum, extracellular 82.93 81.76
KRH41678 Soybean nucleus 76.22 76.37
Solyc09g010210.2.1 Tomato plastid 75.2 75.66
PGSC0003DMT400023082 Potato extracellular, vacuole 75.2 75.66
KRH60381 Soybean nucleus 75.61 75.61
GSMUA_Achr5P05960_001 Banana extracellular, vacuole 72.56 71.54
TraesCS7D01G207600.1 Wheat extracellular 71.54 70.54
HORVU7Hr1G041610.1 Barley vacuole 71.95 70.52
Os02t0733300-01 Rice extracellular 72.76 70.47
TraesCS6B01G325400.1 Wheat extracellular 70.73 70.16
TraesCS6A01G295300.1 Wheat extracellular 70.73 70.16
Os06t0256900-01 Rice endoplasmic reticulum, extracellular, vacuole 70.73 70.02
HORVU6Hr1G073570.3 Barley extracellular 70.73 70.02
TraesCS7A01G204500.1 Wheat extracellular 71.54 69.98
TraesCS6D01G275900.1 Wheat extracellular 70.12 69.28
EES07307 Sorghum vacuole 70.33 68.65
Zm00001d037338_P001 Maize vacuole 68.9 67.8
Zm00001d017949_P001 Maize extracellular 66.67 67.63
TraesCS7B01G111700.1 Wheat extracellular 71.75 66.86
EER89549 Sorghum mitochondrion 69.92 61.21
CDY42599 Canola cytosol 56.71 58.74
CDX97262 Canola vacuole 60.37 57.78
CDY41955 Canola extracellular, vacuole 57.52 57.17
CDY22043 Canola extracellular, vacuole 60.16 57.14
CDY52780 Canola extracellular, vacuole 59.96 56.95
CDY32480 Canola extracellular, vacuole 58.33 56.05
CDY37459 Canola endoplasmic reticulum, extracellular 57.52 55.49
CDY25758 Canola extracellular, vacuole 54.27 55.28
CDY12503 Canola extracellular, vacuole 54.27 55.28
CDY66787 Canola extracellular, plastid, vacuole 52.44 53.31
CDX96319 Canola extracellular, plastid, vacuole 52.24 53.1
CDY22400 Canola extracellular, vacuole 49.8 52.69
CDY41954 Canola vacuole 49.59 52.25
CDY03686 Canola extracellular 51.22 52.17
CDY37939 Canola extracellular, vacuole 51.22 52.17
CDY22399 Canola extracellular 51.83 51.83
CDX72723 Canola extracellular 51.83 51.83
CDY03687 Canola extracellular 50.81 51.65
CDY42597 Canola extracellular 48.98 51.61
CDY37936 Canola extracellular 47.76 51.54
CDY01915 Canola cytosol 37.6 50.96
CDY60076 Canola extracellular 24.39 49.59
CDY10945 Canola extracellular, vacuole 46.75 47.92
CDX94202 Canola vacuole 46.54 47.71
CDY10895 Canola extracellular 46.34 47.5
CDY44116 Canola extracellular 46.14 47.29
CDY12319 Canola cytosol, extracellular, vacuole 44.92 45.47
CDX87948 Canola extracellular, vacuole 44.92 45.47
CDY21221 Canola golgi, vacuole 44.51 45.06
CDY30943 Canola golgi, vacuole 44.51 45.06
CDX74668 Canola extracellular 44.92 44.83
CDX74667 Canola extracellular, vacuole 39.23 44.57
CDY47674 Canola extracellular, vacuole 44.31 44.22
CDX74666 Canola vacuole 43.9 44.17
CDY47675 Canola vacuole 43.9 44.17
CDX74664 Canola extracellular, vacuole 43.7 43.97
CDX83426 Canola extracellular, plastid, vacuole 42.48 43.63
CDY19428 Canola vacuole 46.14 43.49
CDY17123 Canola vacuole 45.94 43.3
CDY19174 Canola vacuole 45.94 42.88
CDX95605 Canola extracellular, vacuole 42.89 42.28
CDY23776 Canola vacuole 45.12 42.21
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 49.59 39.35
CDY47849 Canola extracellular, vacuole 49.59 39.35
CDY46529 Canola extracellular, vacuole 49.39 39.13
CDY05130 Canola extracellular, vacuole 48.78 38.34
CDX90780 Canola endoplasmic reticulum, extracellular 48.37 38.02
CDX93707 Canola vacuole 44.51 35.1
CDY60075 Canola vacuole 44.31 34.82
CDY65179 Canola extracellular 44.31 34.82
CDY59895 Canola cytosol, vacuole 32.72 31.76
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 25.81 30.09
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078EUU1
EnsemblPlants:CDY04737ProteinID:CDY04737ProteinID:CDY04737.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00119383001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592
ScanProsite:PS00698PANTHER:PTHR22298PANTHER:PTHR22298:SF28MetaCyc:PWY-6788SUPFAM:SSF48208SignalP:SignalP-noTM
UniParc:UPI0004EE4CD1SEG:seg::::
Description
BnaC05g18520D
Coordinates
chrLK031957:-:229139..231345
Molecular Weight (calculated)
54483.4 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.156
Length
492 amino acids
Sequence
(BLAST)
001: MAGKSLTLSG LAAAIILVML LLSPEICTGH DYRDALKKSI LFFEGQRSGK LPPDQRLKWR RDSALRDGSS AGVDLTGGYY DAGDNVKFGF PMAFTTTMMS
101: WSVIDFGKTM GPELENALKA IKWGTDYLLK ATAIPSVVFV QVGDAYSDHN CWERPEDMDT LRTVYKVDKD HPGSEVAGET AAALAAASIV FAKRDLAYSK
201: RLLDRAARVF AFANKYRGAY SDSLRHAVCP FYCNFNGYED ELLWGAAWLH KASKKRVYRL YIVKNKEILR AGETIHEFGW DNKHAGINVL ISKMVLMGKS
301: DYFQSFKQNA DEFICSLLPG ISHPQVEYSL GGLLVKSGGS NMQHVTSLSF LLLTYSNYLS HAKKVVPCGQ FTASPALLRQ VAKRQVDYIL GDNPMKMSYM
401: VGYGSRFPQR IHHRGSSVPS VVDHPARIGC KEGSRYFLSP NPNPNLLIGA VVGGPNVTDD FPDSRPYFQL TEPTTYINAP LLGLLSYFSA HA
Best Arabidopsis Sequence Match ( AT1G23210.1 )
(BLAST)
001: MAGKSFMTPA IMLAMLLLIS PETYAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLTGGYYDAG DNVKFGFPMA FTTTMMSWSV
101: IDFGKTMGPE LENAVKAIKW GTDYLMKATQ IPDVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDKDHSG SEVAGETAAA LAAASIVFEK RDPVYSKMLL
201: DRATRVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL WGAAWLHKAS KKRVYREFIV KNQVILRAGD TIHEFGWDNK HAGINVLVSK MVLMGKAEYF
301: QSFKQNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL TYSNYLSHAN KVVPCGEFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY
401: GSRFPQKIHH RGSSVPSVVD HPDRIGCKDG SRYFFSNNPN PNLLIGAVVG GPNITDDFPD SRPYFQLTEP TTYINAPLLG LLGYFSAHY
Arabidopsis Description
AtGH9B6Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.