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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007982.1-P Field mustard extracellular 94.82 94.63
CDY03687 Canola extracellular 94.0 93.8
CDY37936 Canola extracellular 80.12 84.87
CDY03686 Canola extracellular 84.47 84.47
CDX96319 Canola extracellular, plastid, vacuole 80.95 80.79
CDY66787 Canola extracellular, plastid, vacuole 80.75 80.58
AT1G71380.1 Thale cress extracellular 80.12 79.96
CDY25758 Canola extracellular, vacuole 77.23 77.23
CDY12503 Canola extracellular, vacuole 76.4 76.4
KRH62487 Soybean extracellular, vacuole 68.32 68.18
KRH56424 Soybean extracellular, vacuole 67.91 67.77
VIT_18s0089g00210.t01 Wine grape extracellular, vacuole 68.32 66.8
Solyc11g040340.1.1 Tomato extracellular, vacuole 64.6 65.14
PGSC0003DMT400021687 Potato vacuole 64.18 64.32
GSMUA_Achr6P07430_001 Banana extracellular, vacuole 56.94 59.52
TraesCS6D01G089200.1 Wheat golgi 51.97 58.1
Zm00001d025475_P001 Maize extracellular, vacuole 59.63 56.58
TraesCS6A01G093200.1 Wheat golgi 58.18 56.54
HORVU2Hr1G077130.1 Barley extracellular, vacuole 58.39 56.51
TraesCS2D01G308500.1 Wheat golgi 57.97 56.22
TraesCS6B01G122000.1 Wheat vacuole 47.62 56.1
Os04t0443300-00 Rice vacuole 57.76 55.8
TraesCS2B01G327200.1 Wheat nucleus 58.59 55.71
EES12225 Sorghum plastid 58.59 54.95
TraesCS2A01G310200.1 Wheat vacuole 56.94 54.46
CDY42599 Canola cytosol 52.38 53.26
CDY32480 Canola extracellular, vacuole 56.11 52.93
CDY37459 Canola endoplasmic reticulum, extracellular 55.49 52.55
CDX97262 Canola vacuole 55.49 52.14
CDX68334 Canola endoplasmic reticulum 52.59 52.05
CDY23486 Canola extracellular 52.59 52.05
CDY41955 Canola extracellular, vacuole 53.21 51.92
CDY21424 Canola extracellular 52.8 51.62
CDY22043 Canola extracellular, vacuole 55.28 51.54
CDY52780 Canola extracellular, vacuole 55.07 51.35
CDY04737 Canola extracellular, vacuole 52.17 51.22
CDY11552 Canola endoplasmic reticulum, extracellular 52.8 51.1
CDX96271 Canola extracellular, vacuole 52.8 51.1
CDY10945 Canola extracellular, vacuole 47.0 47.29
CDX94202 Canola vacuole 46.58 46.88
CDY10895 Canola extracellular 46.58 46.88
CDY01915 Canola cytosol 35.2 46.83
CDY44116 Canola extracellular 45.96 46.25
CDY41954 Canola vacuole 44.51 46.04
CDY60076 Canola extracellular 22.98 45.87
CDX83426 Canola extracellular, plastid, vacuole 45.34 45.72
CDY30943 Canola golgi, vacuole 45.55 45.27
CDY21221 Canola golgi, vacuole 45.55 45.27
CDX74666 Canola vacuole 45.76 45.19
CDX72723 Canola extracellular 45.96 45.12
CDY42597 Canola extracellular 43.48 44.97
CDY47674 Canola extracellular, vacuole 45.76 44.83
CDY47675 Canola vacuole 45.34 44.79
CDX74664 Canola extracellular, vacuole 45.34 44.79
CDY22399 Canola extracellular 45.55 44.72
CDX74668 Canola extracellular 45.55 44.62
CDX74667 Canola extracellular, vacuole 39.96 44.57
CDY12319 Canola cytosol, extracellular, vacuole 44.72 44.44
CDX87948 Canola extracellular, vacuole 44.72 44.44
CDY22400 Canola extracellular, vacuole 42.24 43.87
CDX95605 Canola extracellular, vacuole 44.93 43.49
CDY19428 Canola vacuole 43.89 40.61
CDY17123 Canola vacuole 43.89 40.61
CDY19174 Canola vacuole 44.31 40.61
CDY23776 Canola vacuole 43.89 40.3
CDY47849 Canola extracellular, vacuole 45.13 35.16
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 45.13 35.16
CDY46529 Canola extracellular, vacuole 44.93 34.94
CDX90780 Canola endoplasmic reticulum, extracellular 44.93 34.66
CDY05130 Canola extracellular, vacuole 44.72 34.5
CDY65179 Canola extracellular 44.51 34.34
CDY60075 Canola vacuole 44.51 34.34
CDX93707 Canola vacuole 44.1 34.13
CDY59895 Canola cytosol, vacuole 32.92 31.36
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 22.77 26.07
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:21.1.3.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078HKT4
UniProt:A0A078HKT4EnsemblPlants:CDY37939ProteinID:CDY37939ProteinID:CDY37939.1GO:GO:0000272GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798GO:GO:0030245EnsemblPlantsGene:GSBRNA2T00064956001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592PANTHER:PTHR22298
PANTHER:PTHR22298:SF54MetaCyc:PWY-6788SUPFAM:SSF48208SignalP:SignalP-noTMUniParc:UPI0004EF2ED2SEG:seg
Description
BnaC02g20720DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078HKT4]
Coordinates
chrLK032412:-:145929..147866
Molecular Weight (calculated)
53790.3 Da
IEP (calculated)
6.183
GRAVY (calculated)
-0.273
Length
483 amino acids
Sequence
(BLAST)
001: MSSLFFLVFL FSSFLTLNVD ANPNYVEALS KSLLFFQGQR SGPLPTDQQL SWRASSGLSD GSSANVDLTG AYYDAGDNVK FNFPMAFTTT MLSWSTFDYG
101: EQMGLELQNA RVNIRWATDY LLKCATATPG KLYVGVGDPN ADHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA ASMVFREVDS EYSLLLLATA
201: KNVMEFAIKY RGNYSDSLSS SVCPFYCSYS GYKDELMWGA AWLQKATNDP NYKNFIESLG GGDHPDIFNW DSKYAGAYVL LSQRALVNKD INYELYKQEA
301: ESFIRKILPN SPSTHYTPGG LMYKLPQSNL QHVTAITFLL TTYAKYMKAT QHIFNCGNSV IVNPDTLISL SKQQVDYILG ENPIKMSYMV GFGSRFPMRI
401: HHRASSLPSQ VLLSKPFNCT EGFQFYHTQN PNPNIVTGAI VGGPDKNDEY PDKRDHYIHS EPGTYINAPF VRPLAYFASR GSA
Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)
001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S
Arabidopsis Description
CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.