Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G077130.1 | Barley | extracellular, vacuole | 93.11 | 94.79 |
| TraesCS2D01G308500.1 | Wheat | golgi | 92.91 | 94.78 |
| TraesCS2A01G310200.1 | Wheat | vacuole | 92.52 | 93.07 |
| TraesCS6B01G122000.1 | Wheat | vacuole | 72.24 | 89.51 |
| Os04t0443300-00 | Rice | vacuole | 76.57 | 77.8 |
| Zm00001d025475_P001 | Maize | extracellular, vacuole | 75.39 | 75.25 |
| EES12225 | Sorghum | plastid | 75.39 | 74.37 |
| VIT_18s0089g00210.t01 | Wine grape | extracellular, vacuole | 62.4 | 64.17 |
| GSMUA_Achr6P07430_001 | Banana | extracellular, vacuole | 57.48 | 63.2 |
| KRH56424 | Soybean | extracellular, vacuole | 59.45 | 62.4 |
| KRH62487 | Soybean | extracellular, vacuole | 59.06 | 61.98 |
| CDY12503 | Canola | extracellular, vacuole | 58.46 | 61.49 |
| AT1G71380.1 | Thale cress | extracellular | 58.46 | 61.36 |
| CDY25758 | Canola | extracellular, vacuole | 58.07 | 61.08 |
| CDX96319 | Canola | extracellular, plastid, vacuole | 58.07 | 60.95 |
| CDY66787 | Canola | extracellular, plastid, vacuole | 57.87 | 60.74 |
| Bra016143.1-P | Field mustard | extracellular, plastid, vacuole | 57.68 | 60.54 |
| Bra012349.1-P | Field mustard | extracellular, plastid, vacuole | 57.48 | 60.46 |
| Solyc11g040340.1.1 | Tomato | extracellular, vacuole | 56.89 | 60.33 |
| AT1G22880.1 | Thale cress | extracellular | 57.48 | 60.33 |
| PGSC0003DMT400021687 | Potato | vacuole | 56.69 | 59.75 |
| Bra007982.1-P | Field mustard | extracellular | 56.69 | 59.5 |
| CDY03687 | Canola | extracellular | 56.1 | 58.88 |
| CDY37939 | Canola | extracellular, vacuole | 55.71 | 58.59 |
| CDY03686 | Canola | extracellular | 55.71 | 58.59 |
| Bra007983.1-P | Field mustard | extracellular | 55.31 | 58.18 |
| CDY37936 | Canola | extracellular | 51.57 | 57.46 |
| TraesCS1B01G377100.1 | Wheat | extracellular, vacuole | 54.72 | 55.94 |
| TraesCS5B01G169500.1 | Wheat | unclear | 52.17 | 53.11 |
| TraesCS5B01G169600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 51.57 | 52.72 |
| TraesCS7B01G219100.1 | Wheat | extracellular | 50.98 | 52.43 |
| TraesCS6B01G325400.1 | Wheat | extracellular | 49.8 | 51.01 |
| TraesCS5B01G318000.1 | Wheat | vacuole | 50.98 | 50.49 |
| TraesCS7B01G111700.1 | Wheat | extracellular | 51.38 | 49.43 |
| TraesCS1B01G107700.1 | Wheat | extracellular | 44.69 | 44.86 |
| TraesCS1B01G090700.1 | Wheat | extracellular, vacuole | 42.52 | 44.08 |
| TraesCS6B01G342600.1 | Wheat | vacuole | 42.91 | 40.9 |
| TraesCS6B01G150300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.32 | 40.64 |
| TraesCS7B01G104600.1 | Wheat | vacuole | 42.52 | 40.53 |
| TraesCS6B01G368000.1 | Wheat | extracellular | 39.57 | 40.28 |
| TraesCS7B01G046900.1 | Wheat | vacuole | 40.94 | 40.15 |
| TraesCS7B01G047000.1 | Wheat | extracellular, vacuole | 40.35 | 39.81 |
| TraesCS5B01G201100.1 | Wheat | vacuole | 41.73 | 39.33 |
| TraesCS2B01G586600.1 | Wheat | extracellular | 43.7 | 36.16 |
| TraesCS4B01G104500.1 | Wheat | extracellular, vacuole | 43.9 | 35.97 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:21.1.3.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | PFAM:PF00759 | ScanProsite:PS00592 |
| ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF54 | SUPFAM:SSF48208 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G327200 |
| EnsemblPlants:TraesCS2B01G327200.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:468551164..468553016
Molecular Weight (calculated)
55089.4 Da
IEP (calculated)
7.935
GRAVY (calculated)
-0.328
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSAALASS SRSPVAVFLA FSLVWLSSHV LAAGHPDYTD ALTKSLLFFQ GQRSGRLPAD QAVKWRSNSA MSDGSAANVD LTGGYYDGGD NVKFNFPTAF
101: TTTMLSWSII EYGGRMEGRV HDARAAVRWA TDYLLKAAKT TPGKLYVGVG DADADHRCWE RPEDMDTPRN VYEVSASAPG SDVAGETAAA LAAASLVFKA
201: ADPDYSRRLV AAARDVMAFA WQHQGKYSDH VGGGVSNYYP SYSGYKDELL WGSAWLLWAT KNSSYLNDLI SLGANDGVDM FSWDNKLAGA RVLLSRRALL
301: DGDKRLEPFT RQAEEFICRV LPKSSSPSST TPYTPGGLMH RSGNANLQYV ASASFLLTTY AKYMAVSNHA FSCQNLPVTY KSLRALAKRQ VDYVLGDNPL
401: GMSYMVGYGA RSPQRIHHRA SSMPSMAAHP AHIGCQEGFQ SYLYASGPNP NVHTGAIVGG PDQNDAFPDD RADYARSEPT TYTNAPLVGC LAYFAGSYKK
501: EKKETNQG
101: TTTMLSWSII EYGGRMEGRV HDARAAVRWA TDYLLKAAKT TPGKLYVGVG DADADHRCWE RPEDMDTPRN VYEVSASAPG SDVAGETAAA LAAASLVFKA
201: ADPDYSRRLV AAARDVMAFA WQHQGKYSDH VGGGVSNYYP SYSGYKDELL WGSAWLLWAT KNSSYLNDLI SLGANDGVDM FSWDNKLAGA RVLLSRRALL
301: DGDKRLEPFT RQAEEFICRV LPKSSSPSST TPYTPGGLMH RSGNANLQYV ASASFLLTTY AKYMAVSNHA FSCQNLPVTY KSLRALAKRQ VDYVLGDNPL
401: GMSYMVGYGA RSPQRIHHRA SSMPSMAAHP AHIGCQEGFQ SYLYASGPNP NVHTGAIVGG PDQNDAFPDD RADYARSEPT TYTNAPLVGC LAYFAGSYKK
501: EKKETNQG
001: MTSLFFFVLL FSSLLISNGD ANPNYKEALS KSLLFFQGQR SGPLPRGQQI SWRASSGLSD GSAAHVDLTG GYYDAGDNVK FNLPMAFTTT MLSWSALEYG
101: KRMGPELENA RVNIRWATDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSASNPGSDV AAETAAALAA ASMVFRKVDS KYSRLLLATA
201: KDVMQFAIQY QGAYSDSLSS SVCPFYCSYS GYKDELMWGA SWLLRATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA
301: ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFSSNFPKR
401: IHHRASSLPS HALRSQSLGC NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA GRST
101: KRMGPELENA RVNIRWATDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSASNPGSDV AAETAAALAA ASMVFRKVDS KYSRLLLATA
201: KDVMQFAIQY QGAYSDSLSS SVCPFYCSYS GYKDELMWGA SWLLRATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA
301: ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFSSNFPKR
401: IHHRASSLPS HALRSQSLGC NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA GRST
Arabidopsis Description
CEL3Endoglucanase [Source:UniProtKB/TrEMBL;Acc:Q0V7W1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.