Factsheet for TraesCS5B01G169500.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	95.99	96.38
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	95.79	95.79
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	94.59	94.97
Os02t0123700-01	Rice	extracellular	78.96	78.33
EES04405	Sorghum	plasma membrane, vacuole	75.95	73.74
Zm00001d015067_P001	Maize	plasma membrane, vacuole	75.75	72.28
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	61.32	68.3
TraesCS7B01G219100.1	Wheat	extracellular	67.54	68.22
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	64.53	65.31
Solyc08g083210.2.1	Tomato	extracellular, vacuole	63.93	64.19
PGSC0003DMT400031897	Potato	endoplasmic reticulum, extracellular	63.93	64.06
KRG97785	Soybean	extracellular	61.32	60.71
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	59.12	59.36
TraesCS6B01G325400.1	Wheat	extracellular	53.11	53.43
TraesCS6B01G122000.1	Wheat	vacuole	43.29	52.68
TraesCS2B01G327200.1	Wheat	nucleus	53.11	52.17
TraesCS5B01G318000.1	Wheat	vacuole	53.11	51.66
TraesCS7B01G111700.1	Wheat	extracellular	54.51	51.52
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	48.1	48.98
TraesCS1B01G107700.1	Wheat	extracellular	48.5	47.83
TraesCS7B01G046900.1	Wheat	vacuole	46.89	45.17
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	46.49	45.05
TraesCS6B01G342600.1	Wheat	vacuole	47.49	44.47
TraesCS7B01G104600.1	Wheat	vacuole	47.09	44.09
TraesCS6B01G368000.1	Wheat	extracellular	43.09	43.09
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.69	42.16
TraesCS5B01G201100.1	Wheat	vacuole	45.49	42.12
TraesCS2B01G586600.1	Wheat	extracellular	47.29	38.44
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	47.09	37.9

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF32	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5B01G169500
EnsemblPlants:TraesCS5B01G169500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:314192127..314193995

Molecular Weight (calculated)

53304.5 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.139

Length

499 amino acids

Sequence
(BLAST)

001: MGPSKACMSA YLIAVLCLVA GARNAAAFNY ADALDKAVLF FEAQRSGKLP PGQRVAWRAD SALSDGNASN VDLVGGYYDA GDNVKFGLPM AFMVTMLSWS
101: VVEFGGAMPG GQLANAEAAV RWGSDYLLKA ATATPGALYV QVADPYQDHR CWERPEDMDT PRAVYKVTPQ SPGSDVAGET AAALAAASLV FRAREPAYSS
201: RLLRAARQVF DFADRYRGSY SDSLSSVVCP FYCSYSGYQD ELLWAATWLH LASSPSPSSQ GVYMSYINSN GHTLGAEQDS YTVSWDDKRA ATKVLLSKVL
301: LQNRVEGLRG YKAHADKYIC SLVPGAGGFQ SQYTPGGLLF KEGDSNMEYV TSTAFLLLTY AKYLGSTGGA ASCGATAVTP STLVSLAKKQ VDYILGANPA
401: GMSYMVGFGA RYPRRVHHRG ASMPSVRDHP ARIGCDEGFH YLHSSDPDRN VLVGAVVGGP DQSDSYSDSR DNYAQAEPST YTNAPLVGAL AFFSGARSA

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.