Factsheet for TraesCS6B01G122000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G093200.1	Wheat	golgi	93.41	77.06
TraesCS6D01G089200.1	Wheat	golgi	79.76	75.69
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	89.51	73.55
TraesCS2B01G327200.1	Wheat	nucleus	89.51	72.24
Os04t0443300-00	Rice	vacuole	74.88	61.4
Zm00001d025475_P001	Maize	extracellular, vacuole	73.66	59.33
EES12225	Sorghum	plastid	74.39	59.22
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	62.44	51.82
KRH62487	Soybean	extracellular, vacuole	59.51	50.41
AT1G71380.1	Thale cress	extracellular	59.27	50.21
KRH56424	Soybean	extracellular, vacuole	59.27	50.21
CDX96319	Canola	extracellular, plastid, vacuole	58.78	49.79
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	56.1	49.78
CDY25758	Canola	extracellular, vacuole	58.54	49.69
CDY12503	Canola	extracellular, vacuole	58.54	49.69
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	58.54	49.59
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	58.05	49.28
CDY66787	Canola	extracellular, plastid, vacuole	58.05	49.17
AT1G22880.1	Thale cress	extracellular	57.56	48.76
Bra007982.1-P	Field mustard	extracellular	56.59	47.93
CDY37939	Canola	extracellular, vacuole	56.1	47.62
Solyc11g040340.1.1	Tomato	extracellular, vacuole	55.61	47.6
CDY03686	Canola	extracellular	55.85	47.41
CDY03687	Canola	extracellular	55.85	47.31
PGSC0003DMT400021687	Potato	vacuole	55.61	47.3
Bra007983.1-P	Field mustard	extracellular	55.61	47.2
CDY37936	Canola	extracellular	50.24	45.18
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	53.17	43.86
TraesCS5B01G169500.1	Wheat	unclear	52.68	43.29
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.71	42.66
TraesCS7B01G219100.1	Wheat	extracellular	50.49	41.9
TraesCS6B01G325400.1	Wheat	extracellular	48.54	40.12
TraesCS7B01G111700.1	Wheat	extracellular	50.73	39.39
TraesCS5B01G318000.1	Wheat	vacuole	49.02	39.18
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	41.95	35.1
TraesCS1B01G107700.1	Wheat	extracellular	42.93	34.78
TraesCS6B01G342600.1	Wheat	vacuole	43.9	33.77
TraesCS7B01G104600.1	Wheat	vacuole	43.17	33.21
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.44	32.89
TraesCS7B01G046900.1	Wheat	vacuole	41.46	32.82
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	40.98	32.62
TraesCS5B01G201100.1	Wheat	vacuole	42.2	32.1
TraesCS6B01G368000.1	Wheat	extracellular	39.02	32.06
TraesCS2B01G586600.1	Wheat	extracellular	43.9	29.32
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	43.9	29.03

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF54	SUPFAM:SSF48208
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G122000	EnsemblPlants:TraesCS6B01G122000.1	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:116746219..116747729

Molecular Weight (calculated)

44451.3 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.199

Length

410 amino acids

Sequence
(BLAST)

001: MSNSAALAPS SRAAVFLAFS LICFSSHVLA AGHPHYADAL AKSLLFFQGQ RSGRLPPDQA VKWRSNSAMS DGSAANVDLT GGYYDGGNNV KFNFPMAFTA
101: TMLSWSIIEY GGRMEGRVHD ARAAVRWATD YLLKSAMTTP GKLYVGVGDA DADHRCWERP EDMDTPRDVH AVSASAPGSD VAGETAAALA AASVVFRAAD
201: PAYSRRLVAA ARDVMALAWR HQGKYSDHVG GGVSNYYPSY SGYKDELLWG SAWLLWATKN SSYLNDLISL GANDDVDVFS WDNKLAGARV LLSRRALLDG
301: DKRLEPFTRQ AEELICHILP NSSSPSSTTA YTPGGLMHRR GNVNMQYAAS ASFLLTTYAK YMAASHRRAF SCQSHGVTHR ALRALAKRQV DYVLGDNPLG
401: MSYMVGYGAR

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.