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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03686 Canola extracellular 93.42 88.2
CDY03687 Canola extracellular 86.84 81.82
CDY37939 Canola extracellular, vacuole 84.87 80.12
CDX96319 Canola extracellular, plastid, vacuole 79.17 74.59
CDY66787 Canola extracellular, plastid, vacuole 78.95 74.38
AT1G71380.1 Thale cress extracellular 77.63 73.14
CDY12503 Canola extracellular, vacuole 75.22 71.01
CDY25758 Canola extracellular, vacuole 74.78 70.6
KRH62487 Soybean extracellular, vacuole 66.89 63.02
VIT_18s0089g00210.t01 Wine grape extracellular, vacuole 67.76 62.55
KRH56424 Soybean extracellular, vacuole 66.23 62.4
Solyc11g040340.1.1 Tomato extracellular, vacuole 63.6 60.54
PGSC0003DMT400021687 Potato vacuole 63.16 59.75
GSMUA_Achr6P07430_001 Banana extracellular, vacuole 54.82 54.11
TraesCS6D01G089200.1 Wheat golgi 50.44 53.24
Zm00001d025475_P001 Maize extracellular, vacuole 58.55 52.46
TraesCS6A01G093200.1 Wheat golgi 57.02 52.31
HORVU2Hr1G077130.1 Barley extracellular, vacuole 57.02 52.1
TraesCS2D01G308500.1 Wheat golgi 56.58 51.81
Os04t0443300-00 Rice vacuole 56.8 51.8
TraesCS2B01G327200.1 Wheat nucleus 57.46 51.57
TraesCS2A01G310200.1 Wheat vacuole 57.02 51.49
EES12225 Sorghum plastid 57.02 50.49
CDY42599 Canola cytosol 52.41 50.32
TraesCS6B01G122000.1 Wheat vacuole 45.18 50.24
CDY32480 Canola extracellular, vacuole 56.36 50.2
CDY37459 Canola endoplasmic reticulum, extracellular 55.92 50.0
CDX68334 Canola endoplasmic reticulum 52.41 48.98
CDY23486 Canola extracellular 52.19 48.77
CDY41955 Canola extracellular, vacuole 52.85 48.69
CDX97262 Canola vacuole 54.61 48.44
CDY21424 Canola extracellular 52.19 48.18
CDY22043 Canola extracellular, vacuole 54.61 48.07
CDY52780 Canola extracellular, vacuole 54.39 47.88
CDY04737 Canola extracellular, vacuole 51.54 47.76
CDX96271 Canola extracellular, vacuole 52.19 47.7
CDY11552 Canola endoplasmic reticulum, extracellular 52.19 47.7
CDY01915 Canola cytosol 36.84 46.28
CDY10945 Canola extracellular, vacuole 48.25 45.83
CDX94202 Canola vacuole 47.81 45.42
CDY10895 Canola extracellular 47.81 45.42
CDY44116 Canola extracellular 47.15 44.79
CDX72723 Canola extracellular 47.81 44.31
CDY22399 Canola extracellular 47.37 43.9
CDX74666 Canola vacuole 45.83 42.74
CDY41954 Canola vacuole 43.64 42.61
CDX83426 Canola extracellular, plastid, vacuole 44.52 42.38
CDY47674 Canola extracellular, vacuole 45.61 42.19
CDY42597 Canola extracellular 43.2 42.18
CDY22400 Canola extracellular, vacuole 42.98 42.15
CDX74668 Canola extracellular 45.39 41.99
CDY47675 Canola vacuole 44.96 41.92
CDY21221 Canola golgi, vacuole 44.52 41.77
CDY30943 Canola golgi, vacuole 44.52 41.77
CDX74664 Canola extracellular, vacuole 44.3 41.31
CDY12319 Canola cytosol, extracellular, vacuole 43.86 41.15
CDX87948 Canola extracellular, vacuole 43.86 41.15
CDX95605 Canola extracellular, vacuole 44.3 40.48
CDX74667 Canola extracellular, vacuole 38.38 40.42
CDY19174 Canola vacuole 44.96 38.9
CDY60076 Canola extracellular 20.61 38.84
CDY19428 Canola vacuole 44.3 38.7
CDY17123 Canola vacuole 44.3 38.7
CDY23776 Canola vacuole 44.08 38.21
CDY47849 Canola extracellular, vacuole 46.27 34.03
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 46.27 34.03
CDY46529 Canola extracellular, vacuole 46.05 33.82
CDY05130 Canola extracellular, vacuole 45.61 33.23
CDX90780 Canola endoplasmic reticulum, extracellular 45.39 33.07
CDY65179 Canola extracellular 44.52 32.43
CDY60075 Canola vacuole 44.52 32.43
CDX93707 Canola vacuole 43.86 32.05
CDY59895 Canola cytosol, vacuole 33.33 29.98
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 25.44 27.49
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078HJS7
UniProt:A0A078HJS7EnsemblPlants:CDY37936ProteinID:CDY37936ProteinID:CDY37936.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00064952001
InterPro:Glyco_hydro_9InterPro:IPR012341PFAM:PF00759PANTHER:PTHR22298PANTHER:PTHR22298:SF54MetaCyc:PWY-6788
SUPFAM:SSF48208SignalP:SignalP-noTMUniParc:UPI0004EEA16ASEG:seg::
Description
BnaC02g20750DBnaC02g20750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJS7]
Coordinates
chrLK032412:-:124548..126433
Molecular Weight (calculated)
50225.7 Da
IEP (calculated)
4.615
GRAVY (calculated)
-0.242
Length
456 amino acids
Sequence
(BLAST)
001: MTSLFFLVFL FSSLLTPNVD ASPIYIEALS KSLLFFHGQR SGPLPTDQQF SWRASSGLSD GSSANVDLVG GYYTEGDNVK HNFPMAFTTT MLSWSTLEYG
101: EQMGLELQNA RDPNADHKCW ERPEDMDTPR TVYSVSPSNP GSDVAAETAA ALAAASMVFR EVDSQYSLLL LATAKNVMQF AIQYRGSYSD SISSVCPFYC
201: SYSGYKDELM WGAAWLLKAT DDSNYKNFIQ SLGGGDQTDI FNWDNKYAGA YVLLSQLALV NSDNTFDQYK LEAESFICKI LPNTPSSSTS YTPGGLMYNY
301: NLPQSNLQHV TAITFLLTTY AKYMKATQHT FNCGNSVNIV PDNLISLSKQ QVDYILGENQ AKMSYMVGFG SSFPMRIHHR GSSIPSQPHF NCADGLQFLY
401: SPNPNPNILT GAIVGGPDKN DESPDKRDDY IHSEPTTYIN APFVGLLAYF ASGGSA
Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)
001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S
Arabidopsis Description
CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.