Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011881.1-P Field mustard cytosol 95.15 99.16
CDY42599 Canola cytosol 94.34 98.32
AT4G39010.1 Thale cress extracellular, vacuole 92.53 92.15
KRH60771 Soybean extracellular, vacuole 70.1 70.67
KRH51463 Soybean extracellular 69.7 69.84
KRH29353 Soybean extracellular, vacuole 70.71 69.72
PGSC0003DMT400008105 Potato endoplasmic reticulum, extracellular, vacuole 69.7 69.7
VIT_03s0038g00630.t01 Wine grape extracellular, vacuole 69.29 69.29
Solyc01g110340.2.1 Tomato extracellular, vacuole 68.89 68.75
GSMUA_Achr2P03400_001 Banana extracellular 63.03 62.53
GSMUA_Achr1P07760_001 Banana vacuole 62.63 61.88
GSMUA_Achr9P20920_001 Banana extracellular, vacuole 54.14 60.91
CDY22400 Canola extracellular, vacuole 56.36 60.0
TraesCS5A01G317400.1 Wheat plastid 61.82 60.0
CDY22399 Canola extracellular 59.6 59.96
TraesCS5B01G318000.1 Wheat vacuole 62.02 59.84
CDX72723 Canola extracellular 59.19 59.55
HORVU5Hr1G081200.5 Barley vacuole 61.82 59.42
CDY41954 Canola vacuole 55.15 58.46
Os09t0530200-01 Rice mitochondrion 60.81 58.45
CDY42597 Canola extracellular 54.95 58.24
CDY04737 Canola extracellular, vacuole 57.17 57.52
CDX68334 Canola endoplasmic reticulum 56.57 57.38
CDY23486 Canola extracellular 56.57 57.38
CDY21424 Canola extracellular 57.17 57.29
CDY11552 Canola endoplasmic reticulum, extracellular 57.17 56.71
CDX96271 Canola extracellular, vacuole 57.17 56.71
TraesCS5D01G323700.2 Wheat vacuole 62.22 56.0
Zm00001d021280_P004 Maize vacuole 61.82 55.64
OQU89810 Sorghum extracellular, plastid, vacuole 62.63 55.46
CDY32480 Canola extracellular, vacuole 57.17 55.27
CDY12503 Canola extracellular, vacuole 53.13 54.45
CDY37459 Canola endoplasmic reticulum, extracellular 55.96 54.31
CDY25758 Canola extracellular, vacuole 52.93 54.24
CDY03686 Canola extracellular 52.32 53.62
CDX97262 Canola vacuole 55.56 53.5
CDX96319 Canola extracellular, plastid, vacuole 52.12 53.31
CDY37939 Canola extracellular, vacuole 51.92 53.21
CDY03687 Canola extracellular 51.92 53.1
CDY66787 Canola extracellular, plastid, vacuole 51.92 53.1
CDY37936 Canola extracellular 48.69 52.85
CDY22043 Canola extracellular, vacuole 54.55 52.12
CDY52780 Canola extracellular, vacuole 54.34 51.93
CDX94202 Canola vacuole 47.88 49.38
CDY10945 Canola extracellular, vacuole 47.68 49.17
CDY01915 Canola cytosol 35.96 49.04
CDY44116 Canola extracellular 47.47 48.96
CDY10895 Canola extracellular 46.67 48.12
CDX83426 Canola extracellular, plastid, vacuole 44.04 45.51
CDX74666 Canola vacuole 44.04 44.58
CDX74668 Canola extracellular 44.24 44.42
CDY47674 Canola extracellular, vacuole 44.04 44.22
CDX95605 Canola extracellular, vacuole 44.44 44.09
CDY30943 Canola golgi, vacuole 43.23 44.03
CDY21221 Canola golgi, vacuole 43.23 44.03
CDY47675 Canola vacuole 43.43 43.97
CDX87948 Canola extracellular, vacuole 42.83 43.62
CDY12319 Canola cytosol, extracellular, vacuole 42.83 43.62
CDX74664 Canola extracellular, vacuole 43.03 43.56
CDX74667 Canola extracellular, vacuole 37.58 42.96
CDY60076 Canola extracellular 20.61 42.15
CDY17123 Canola vacuole 44.44 42.15
CDY19428 Canola vacuole 44.04 41.76
CDY19174 Canola vacuole 44.04 41.37
CDY23776 Canola vacuole 43.43 40.87
CDX90780 Canola endoplasmic reticulum, extracellular 45.66 36.1
CDY05130 Canola extracellular, vacuole 45.66 36.1
CDY47849 Canola extracellular, vacuole 44.24 35.32
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 44.04 35.16
CDY46529 Canola extracellular, vacuole 44.04 35.1
CDY65179 Canola extracellular 42.83 33.87
CDY60075 Canola vacuole 42.83 33.87
CDX93707 Canola vacuole 42.63 33.81
CDY59895 Canola cytosol, vacuole 32.73 31.95
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 23.64 27.73
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078HTT2
UniProt:A0A078HTT2EnsemblPlants:CDY41955ProteinID:CDY41955ProteinID:CDY41955.1GO:GO:0000272GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798GO:GO:0030245EnsemblPlantsGene:GSBRNA2T00073942001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592
ScanProsite:PS00698PANTHER:PTHR22298PANTHER:PTHR22298:SF29MetaCyc:PWY-6788SUPFAM:SSF48208SignalP:SignalP-noTM
UniParc:UPI0004EEF331SEG:seg::::
Description
BnaA01g05270DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078HTT2]
Coordinates
chrLK032511:-:47375..50338
Molecular Weight (calculated)
54838.3 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.271
Length
495 amino acids
Sequence
(BLAST)
001: MKLHFNPLSL IFFFFLFGAA MSSNQHDYSD ALSKSILFFE GQRSGYLPND QRLTWRRNSG LSDGWTHNTD LTGGYYDAGD NVKFNFPMAF TTTMLAWSVI
101: EFGELMPPPE LRNALVALRW SSDYLLKSVS QLPNRIFVQV GDPIADHNCW ERPEDMDTPR TAYVVNAPNP ASEVAGEITA ALSAASIAVR SSDPGYSQTL
201: LQIAVKTFQF ADMHRGAYSS NDDIKNDVCP FYCDFNGFQD ELLWGAAWLR KATGDESYLS YIESNREPFG ASENVDEFGW DNKIGGLNVL VSKEVITGNM
301: YNLEAYKASA ESFMCSLVPE SPGQHVEYTP GGLLYKPGGS QLQHATTISF LLLVYAQYLS RSSLSLNCGS LSVPPDHLRR LAKKQVDYIL GENPMGLSYM
401: VGYGERYPKR IHHRGSSLPS IVDHPGTIGC KDGSVYFNST EPNPNVLIGA VVGGPGEDDM YDDDRSDFRK SEPTTYINAP FVGVLAYFAA NPSFS
Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)
001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS
Arabidopsis Description
AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.