Factsheet for Zm00001d021280_P004

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
vacuole 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	extracellular, mitochondrion, plastid, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89810	Sorghum	extracellular, plastid, vacuole	92.73	91.23
TraesCS5A01G317400.1	Wheat	plastid	78.55	84.71
TraesCS5B01G318000.1	Wheat	vacuole	78.36	84.02
HORVU5Hr1G081200.5	Barley	vacuole	78.55	83.88
TraesCS5D01G323700.2	Wheat	vacuole	80.55	80.55
Os09t0530200-01	Rice	mitochondrion	75.27	80.39
GSMUA_Achr1P07760_001	Banana	vacuole	67.64	74.25
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	59.09	73.86
GSMUA_Achr2P03400_001	Banana	extracellular	66.91	73.75
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	64.0	71.11
KRH60771	Soybean	extracellular, vacuole	62.36	69.86
KRH51463	Soybean	extracellular	62.55	69.64
KRH29353	Soybean	extracellular, vacuole	60.36	66.14
Solyc01g110340.2.1	Tomato	extracellular, vacuole	59.45	65.93
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	59.09	65.66
Bra011881.1-P	Field mustard	cytosol	55.09	63.79
CDY42599	Canola	cytosol	54.73	63.37
AT4G39010.1	Thale cress	extracellular, vacuole	56.0	61.97
CDY41955	Canola	extracellular, vacuole	55.64	61.82
Zm00001d037338_P001	Maize	vacuole	54.36	59.8
Zm00001d009097_P001	Maize	extracellular	54.0	57.12
Zm00001d017949_P001	Maize	extracellular	50.36	57.11
CDY22400	Canola	extracellular, vacuole	46.36	54.84
CDY22399	Canola	extracellular	48.55	54.27
Bra033592.1-P	Field mustard	extracellular	48.55	54.27
AT4G39000.1	Thale cress	extracellular, vacuole	48.55	54.16
CDX72723	Canola	extracellular	48.36	54.06
Bra033591.1-P	Field mustard	extracellular, vacuole	47.82	53.67
CDY41954	Canola	vacuole	45.27	53.32
CDY42597	Canola	extracellular	45.09	53.1
Bra011882.1-P	Field mustard	extracellular	47.09	52.64
Zm00001d025475_P001	Maize	extracellular, vacuole	48.36	52.26
Zm00001d015067_P001	Maize	plasma membrane, vacuole	48.0	50.48
Zm00001d035082_P001	Maize	extracellular	45.82	50.3
Zm00001d032271_P001	Maize	extracellular	41.45	44.62
Zm00001d051814_P002	Maize	vacuole	39.82	41.17
Zm00001d044744_P001	Maize	extracellular, vacuole	40.36	40.96
Zm00001d017978_P001	Maize	plasma membrane	39.82	40.33
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	38.36	40.11
Zm00001d035442_P001	Maize	extracellular, vacuole	29.82	39.33
Zm00001d020371_P001	Maize	mitochondrion	38.36	39.15
Zm00001d008952_P001	Maize	extracellular	44.0	37.52
Zm00001d010446_P001	Maize	vacuole	41.27	36.44
Zm00001d026605_P001	Maize	vacuole	40.73	35.84

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:103633084	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
UniProt:A0A1D6I9L7	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	ProteinID:ONM56703.1
PFAM:PF00759	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM
UniParc:UPI0002209712	EnsemblPlantsGene:Zm00001d021280	EnsemblPlants:Zm00001d021280_P004	EnsemblPlants:Zm00001d021280_T004	SEG:seg	:

Description

Endoglucanase 24

Coordinates

chr7:+:147731896..147735312

Molecular Weight (calculated)

60289.4 Da

IEP (calculated)

5.673

GRAVY (calculated)

-0.368

Length

550 amino acids

Sequence
(BLAST)

001: MGEMAHACSA PRPSPAHHLC VRILLAYLLA ARWLVPSCSA ASFFRFPWPA ERHDYRDALA KSILFFEGQR SGRLPPGQRA SWRGDSGVSD GAAAGVDLEG
101: GYYDAGDNVK FGFPMAFTTT MLAWSVIEFG DSMPRDERRH AAAAVRWATD YLLKTLAHPG VIFLQASARH CCARTATFVH VALAAEQGVG DPWKDHDCWE
201: RPEDMDTDRT VYNVSAGRPG SDIAGETAAA LAAASMVFRD DDPEYAETLL TSARKAFEFA DTYKGAYSDD PDLRAGGCPF YCDFNGYQDE LLWGAAWLRR
301: ASKDDTFLQY IQNNGKTLGA EDSSNEFGWD NKHAGLNVLV SKEFIEGAAL PLQSYKEFAD SFVCTLIPES SSSPHITYTP GGMIYKPGGS NMQHVTSISF
401: LLLTYAKYLS KSSHTVDCGD VSVGPETLQL QAKRQVDYLL GDNPMKMSYM IGYGDRYPQR IHHRASSLPS IRDHPQPMAC KEGTPYFNSS GANPNPLVGA
501: VVGGPGEDDA YEDDRADFRK SEPTTYINAP LVGVLAYFVG NPNPGHNTRH

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.