Factsheet for Zm00001d008952_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	89.92	88.69
Os01t0220100-01	Rice	extracellular, vacuole	75.19	75.78
KXG31545	Sorghum	cytosol	61.55	72.98
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	69.3	71.75
Os01t0219600-00	Rice	mitochondrion	71.01	71.56
Zm00001d010446_P001	Maize	vacuole	67.29	69.66
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	67.91	69.52
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	68.53	67.69
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	57.98	63.93
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	60.16	62.08
KRH41305	Soybean	nucleus	60.16	62.08
KRH60035	Soybean	nucleus	60.0	62.02
Solyc08g082250.2.1	Tomato	extracellular	59.84	61.76
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	59.69	61.21
PGSC0003DMT400012809	Potato	extracellular, vacuole	50.7	60.56
CDY47849	Canola	extracellular, vacuole	57.83	60.16
CDY05130	Canola	extracellular, vacuole	58.29	60.06
CDX90780	Canola	endoplasmic reticulum, extracellular	58.29	60.06
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	57.67	60.0
CDY46529	Canola	extracellular, vacuole	57.67	59.9
AT4G11050.1	Thale cress	vacuole	57.98	59.74
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	57.52	59.74
Bra027735.1-P	Field mustard	extracellular, vacuole	57.36	59.68
Zm00001d051814_P002	Maize	vacuole	47.75	57.89
Zm00001d017978_P001	Maize	plasma membrane	48.22	57.27
Zm00001d020371_P001	Maize	mitochondrion	47.13	56.4
Zm00001d044744_P001	Maize	extracellular, vacuole	45.74	54.43
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	44.03	53.99
Solyc12g055970.1.1	Tomato	cytosol, nucleus	38.6	53.9
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	34.26	52.37
Zm00001d009097_P001	Maize	extracellular	40.0	49.62
Zm00001d035442_P001	Maize	extracellular, vacuole	31.78	49.16
Zm00001d026605_P001	Maize	vacuole	46.82	48.32
Zm00001d015067_P001	Maize	plasma membrane, vacuole	38.45	47.42
Zm00001d037338_P001	Maize	vacuole	36.74	47.4
Zm00001d017949_P001	Maize	extracellular	35.5	47.22
Zm00001d032271_P001	Maize	extracellular	37.05	46.77
Zm00001d035082_P001	Maize	extracellular	35.5	45.71
Zm00001d021280_P004	Maize	vacuole	37.52	44.0
Zm00001d025475_P001	Maize	extracellular, vacuole	34.42	43.61

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:103634987	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
ProteinID:AQK91066.1	InterPro:CBM_49	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	UniProt:K7URD6	PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF46	SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002211241	EnsemblPlantsGene:Zm00001d008952	EnsemblPlants:Zm00001d008952_P001	EnsemblPlants:Zm00001d008952_T001	SEG:seg	:

Description

Endoglucanase 6

Coordinates

chr8:-:26876569..26879670

Molecular Weight (calculated)

69137.6 Da

IEP (calculated)

6.903

GRAVY (calculated)

-0.273

Length

645 amino acids

Sequence
(BLAST)

001: MAGYSMAAVA LAGIALALAA ATTTQVASAA GGHDYREALS KSILYFEAQR SGRLPGSQRV AWRADSGLLD GKANGVDLVG GYYDAGDNVK FGLPMAFTVT
101: MMSWSVIEYG DQMAAAGELG HATDAIKWGT DYLVKAHPEP NVLYGEVGDG DSDHDCWMRP EDMTTSRQAY RLDPQNPGSE LAGETAAAMA AASLVFRSSN
201: PGYANTLLQH SKQLFDFADK YRGRYDSSIT VARQYYASSS GYGDELLWAA AWLHEATGDA RYLDYLANNA DALGGTGWSI NQFGWDVKYP GVQVLAAMTL
301: LRRRGDAGAG AHADVLQRYK QQADLFACSC LGRGGPNSVR RTPGGMVYHQ NWNNVQFVTS AAFLLAAYAD HLAAAGQGAR CPAGGTAQPS ELLAFARSQV
401: DYILGSNPRA TSYMVGYGAT YPRQVHHRGA SIVSVRANPS FVSCQAGYSS WYHRRAANPN LIVGATVGGP DEYDNFADER DNYEQTEATT YNNAPLMGVL
501: ARLAAGHGGG GGKFGHHSLA ADAVSSSTSI NDTNRTSLPS PSPDSEHPSA WPIEIEQNAT ASWTKQGKTY RRYAVTVTNR SPKTVHELHI GISKLYGQVW
601: GVDKARYGYV LPSWIPSLLA GKSAVFVYVQ AAPPADVWVT GYKLI

Best Arabidopsis Sequence Match ( AT4G11050.3 )
(BLAST)

001: MGSRTTISIL VVLLLGLVQL AISGHDYKQA LSKSILFFEA QRSGHLPPNQ RVSWRSHSGL YDGKSSGVDL VGGYYDAGDN VKFGLPMAFT VTTMCWSIIE
101: YGGQLESNGE LGHAIDAVKW GTDYFIKAHP EPNVLYGEVG DGKSDHYCWQ RPEEMTTDRR AYKIDRNNPG SDLAGETAAA MAAASIVFRR SDPSYSAELL
201: RHAHQLFEFA DKYRGKYDSS ITVAQKYYRS VSGYNDELLW AAAWLYQATN DKYYLDYLGK NGDSMGGTGW SMTEFGWDVK YAGVQTLVAK VLMQGKGGEH
301: TAVFERYQQK AEQFMCSLLG KSTKNIKKTP GGLIFRQSWN NMQFVTSASF LATVYSDYLS YSKRDLLCSQ GNISPSQLLE FSKSQVDYIL GDNPRATSYM
401: VGYGENYPRQ VHHRGSSIVS FNVDQKFVTC RGGYATWFSR KGSDPNVLTG ALVGGPDAYD NFADQRDNYE QTEPATYNNA PLLGVLARLI SGSTGFDQLL
501: PGVSPTPSPV IIKPAPVPQR KPTKPPASSP SPITISQKMT NSWKNEGKVY YRYSTILTNR STKTLKILKI SITKLYGPIW GVTKTGNSFS FPSWMQSLPS
601: GKSMEFVYIH SASPADVLVS NYSLE

Arabidopsis Description

AtGH9C3Endoglucanase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7I0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.