Factsheet for Zm00001d017978_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
vacuole 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051814_P002	Maize	vacuole	86.74	88.53
TraesCS6B01G342600.1	Wheat	vacuole	82.69	84.24
Os02t0738600-01	Rice	mitochondrion	85.27	83.73
TraesCS6A01G312400.1	Wheat	vacuole	82.87	83.49
TraesCS6D01G291800.1	Wheat	vacuole	82.87	82.72
Zm00001d044744_P001	Maize	extracellular, vacuole	78.64	78.78
Zm00001d020371_P001	Maize	mitochondrion	67.4	67.9
EES07289	Sorghum	mitochondrion	94.29	67.55
PGSC0003DMT400001781	Potato	extracellular, vacuole	61.69	66.6
Solyc07g049300.2.1	Tomato	extracellular, vacuole	61.69	66.6
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	62.98	65.64
GSMUA_Achr7P02160_001	Banana	vacuole	60.04	63.92
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	61.88	63.88
AT2G32990.1	Thale cress	extracellular, vacuole	61.69	63.81
KRH14764	Soybean	cytosol, nucleus, vacuole	47.7	63.79
CDY19428	Canola	vacuole	61.14	63.6
Bra005536.1-P	Field mustard	vacuole	61.14	63.6
CDY17123	Canola	vacuole	61.14	63.6
CDY19174	Canola	vacuole	61.69	63.57
KRH73374	Soybean	vacuole	60.77	62.98
CDY23776	Canola	vacuole	60.41	62.36
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	58.56	62.35
Bra021821.1-P	Field mustard	vacuole	58.2	62.08
Zm00001d008952_P001	Maize	extracellular	57.27	48.22
Zm00001d035442_P001	Maize	extracellular, vacuole	36.28	47.24
Zm00001d010446_P001	Maize	vacuole	54.14	47.19
Zm00001d015067_P001	Maize	plasma membrane, vacuole	45.3	47.04
Zm00001d009097_P001	Maize	extracellular	44.57	46.54
Zm00001d017949_P001	Maize	extracellular	40.88	45.77
Zm00001d035082_P001	Maize	extracellular	41.8	45.31
Zm00001d037338_P001	Maize	vacuole	41.62	45.2
Zm00001d032271_P001	Maize	extracellular	42.17	44.81
Zm00001d025475_P001	Maize	extracellular, vacuole	41.44	44.2
Zm00001d026605_P001	Maize	vacuole	49.17	42.72
Zm00001d021280_P004	Maize	vacuole	40.33	39.82

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1D6HJQ2
ProteinID:AQK74689.1	ProteinID:AQK74690.1	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF52	SUPFAM:SSF48208	SignalP:SignalP-noTM
UniParc:UPI000221D738	EnsemblPlantsGene:Zm00001d017978	EnsemblPlants:Zm00001d017978_P001	EnsemblPlants:Zm00001d017978_T001	SEG:seg	:

Description

Endoglucanase 1

Coordinates

chr5:+:211180278..211183912

Molecular Weight (calculated)

59752.1 Da

IEP (calculated)

7.557

GRAVY (calculated)

-0.364

Length

543 amino acids

Sequence
(BLAST)

001: MRAGAAARGD SPRAMSAAAT PRHRLGVALL LLLVLGGADA KAHSYEDALR KSLLYFEAQR SGRLPHSQRV TWRHHSGLTD GLEQGVDLVG GYYDAGDHVK
101: FGLPMAFTVT MLSWSLIEYG ADVAAAGELG HALEAVKWGT DYFVKAHTRP DELWAEVGDG DTDHYCWQRP EDMTTSRQAY KVDRDHPGSD VAGETAAAMA
201: AASIVFRDSN PHYAHLLLHH AQQLFEFADK YRGKYDSSIA EVKSYYASVS GYKDELLWAA LWLHRATGRA DYLDYVVDNA DSFGGTGWAI NEFSWDVKYA
301: GVQILAARLL LRGEHATRHR STLERYRAKA ERYVCACLGR NTEGGADANV ERSPGGMLYV RQWNNMQYVT SAAFLLSAYS DYLAEAGVRT VSCAGGETVA
401: AREVAALARA QVDYVLGTNP RGVSYLVGYG PKYPSRVHHR AASIVPYKHS KEFIGCTQGF DHWFGRRSSN PNVLVGAIVG GPDRRDRFRD NRENYMQTEA
501: CTYNTAPMVG MFAKLHRLAR QEREQGPTPA PAPAPVTSAA ADV

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.